Resource

Id Histone_ChIP-seq/ENCSR430ZIQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR430ZIQ [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR430ZIQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002170/
  • biosample_summary: Homo sapiens upper lobe of right lung tissue male adult (60 years)
  • date_created: 2022-05-11T01:53:54.848900+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR430ZIQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR430ZIQ float

Histone_ChIP-seq_ENCSR430ZIQ
Histone_ChIP-seq ENCSR430ZIQ [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR430ZIQ [1.6, 12]
n
89,463,929
mean
4.21
sd
1.21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 894639292.78% 92703
chr1 9196008 3.69% 9303
chr2 7293627 3.01% 7549
chr3 6077810 3.07% 6312
chr4 3151013 1.66% 3560
chr5 4445190 2.45% 4720
chr6 4903138 2.87% 5242
chr7 3955885 2.48% 4348
chr8 3645566 2.51% 3906
chr9 4087296 2.95% 4190
chr10 4703560 3.52% 4798
chr11 4961219 3.67% 5028
chr12 4557986 3.42% 4700
chr13 1915470 1.67% 2091
chr14 3128293 2.92% 3161
chr15 3409701 3.34% 3393
chr16 3389766 3.75% 3468
chr17 5220715 6.27% 5053
chr18 1525583 1.90% 1714
chr19 3462439 5.91% 3492
chr20 2731752 4.24% 2690
chr21 944073 2.02% 1077
chr22 2302270 4.53% 2237
chrX 451978 0.29% 665
chrY 3591 0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92703 210 23543 965.06 735
global segment-length histogram

Files

Filename Size md5
ENCFF641CQH.bed.gz 1.88 MB 9ef5b6b3ba40080a867fe938b6066652
ENCFF641CQH.tabix.bed.gz 946.34 KB 2eefa5b359a0920f20ebc6f3ea96a186
ENCFF641CQH.tabix.bed.gz.tbi 270.41 KB ef70b017890d4436e652a4a5c7e20876
genomic_resource.yaml 1.54 KB eae84ac2db68b99f56722bdba289bd45
statistics/