Resource
| Id | Histone_ChIP-seq/ENCSR429YAE |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR429YAE [biosample_summary="Homo sapiens iPS-18a" and target="H3K27ac"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN972TAJ|/analyses/ENCAN972TAJ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR429YAE | float |
Histone_ChIP-seq_ENCSR429YAE |
Histone_ChIP-seq ENCSR429YAE [biosample_summary="Homo sapiens iPS-18a" and target="H3K27ac"]
|
![]() |
[1.85, 29.3] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 13803652 | 0.43% | 25267 |
| chr1 | 1340775 | 0.54% | 2425 |
| chr2 | 987351 | 0.41% | 1838 |
| chr3 | 897975 | 0.45% | 1742 |
| chr4 | 689965 | 0.36% | 1303 |
| chr5 | 817278 | 0.45% | 1522 |
| chr6 | 995520 | 0.58% | 1691 |
| chr7 | 724653 | 0.45% | 1342 |
| chr8 | 501269 | 0.35% | 965 |
| chr9 | 507240 | 0.37% | 927 |
| chr10 | 602876 | 0.45% | 1086 |
| chr11 | 693913 | 0.51% | 1232 |
| chr12 | 806474 | 0.61% | 1414 |
| chr13 | 347400 | 0.30% | 649 |
| chr14 | 446704 | 0.42% | 792 |
| chr15 | 390400 | 0.38% | 708 |
| chr16 | 410638 | 0.45% | 783 |
| chr17 | 603826 | 0.73% | 1069 |
| chr18 | 280078 | 0.35% | 521 |
| chr19 | 578678 | 0.99% | 1113 |
| chr20 | 323427 | 0.50% | 566 |
| chr21 | 134697 | 0.29% | 255 |
| chr22 | 233957 | 0.46% | 431 |
| chrX | 487998 | 0.31% | 891 |
| chrY | 560 | <0.01% | 2 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 25267 | 200 | 5416 | 546.31 | 429 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF221WKU.bed.gz | 537.25 KB | c45fbf3fbc2902ad783222bf2604ed97 |
| ENCFF221WKU.tabix.bed.gz | 262.48 KB | 4a3721b07e2f86300db7f84aa37a21c5 |
| ENCFF221WKU.tabix.bed.gz.tbi | 136.7 KB | a715e4d3249964e8c11ae080369e77f9 |
| genomic_resource.yaml | 1.37 KB | e50f40f9cff75b4966088fa47fcf70a7 |
| statistics/ |
