Resource

Id Histone_ChIP-seq/ENCSR429YAEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR429YAE [biosample_summary="Homo sapiens iPS-18a" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR429YAE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007105/
  • biosample_summary: Homo sapiens iPS-18a
  • date_created: 2015-09-15T19:51:31.997373+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR429YAE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR429YAE float

Histone_ChIP-seq_ENCSR429YAE

Histone_ChIP-seq ENCSR429YAE [biosample_summary="Homo sapiens iPS-18a" and target="H3K27ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR429YAE [1.85, 29.3]
n
13,803,652
mean
6.04
sd
3.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 138036520.43% 25267
chr1 1340775 0.54% 2425
chr2 987351 0.41% 1838
chr3 897975 0.45% 1742
chr4 689965 0.36% 1303
chr5 817278 0.45% 1522
chr6 995520 0.58% 1691
chr7 724653 0.45% 1342
chr8 501269 0.35% 965
chr9 507240 0.37% 927
chr10 602876 0.45% 1086
chr11 693913 0.51% 1232
chr12 806474 0.61% 1414
chr13 347400 0.30% 649
chr14 446704 0.42% 792
chr15 390400 0.38% 708
chr16 410638 0.45% 783
chr17 603826 0.73% 1069
chr18 280078 0.35% 521
chr19 578678 0.99% 1113
chr20 323427 0.50% 566
chr21 134697 0.29% 255
chr22 233957 0.46% 431
chrX 487998 0.31% 891
chrY 560 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25267 200 5416 546.31 429
global segment-length histogram

Files

Filename Size md5
ENCFF221WKU.bed.gz 537.25 KB c45fbf3fbc2902ad783222bf2604ed97
ENCFF221WKU.tabix.bed.gz 262.48 KB 4a3721b07e2f86300db7f84aa37a21c5
ENCFF221WKU.tabix.bed.gz.tbi 136.7 KB a715e4d3249964e8c11ae080369e77f9
genomic_resource.yaml 1.37 KB e50f40f9cff75b4966088fa47fcf70a7
statistics/