Resource

Id Histone_ChIP-seq/ENCSR429EVAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR429EVA [biosample_summary="Homo sapiens skeletal muscle tissue tissue" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR429EVA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001134/
  • biosample_summary: Homo sapiens skeletal muscle tissue tissue
  • date_created: 2015-09-15T19:51:57.062660+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR429EVA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR429EVA float

Histone_ChIP-seq_ENCSR429EVA
Histone_ChIP-seq ENCSR429EVA [biosample_summary="Homo sapiens skeletal muscle tissue tissue" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR429EVA [2.05, 16]
n
11,930,152
mean
5.16
sd
1.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 119301520.37% 29811
chr1 717822 0.29% 1917
chr2 783672 0.32% 2128
chr3 554688 0.28% 1543
chr4 679239 0.36% 1833
chr5 792494 0.44% 2061
chr6 541047 0.32% 1573
chr7 641619 0.40% 1668
chr8 612253 0.42% 1634
chr9 432456 0.31% 1088
chr10 507056 0.38% 1287
chr11 517087 0.38% 1377
chr12 672623 0.50% 1622
chr13 281436 0.25% 819
chr14 296427 0.28% 833
chr15 305281 0.30% 783
chr16 514950 0.57% 1186
chr17 259543 0.31% 634
chr18 210610 0.26% 612
chr19 1893478 3.23% 3368
chr20 241575 0.37% 632
chr21 181144 0.39% 454
chr22 144991 0.29% 386
chrX 71739 0.05% 206
chrY 76922 0.13% 167
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29811 135 11172 400.19 324
global segment-length histogram

Files

Filename Size md5
ENCFF815YKG.bed.gz 547.21 KB 73c53bc9cc47c21322094eb3a656f9d2
ENCFF815YKG.tabix.bed.gz 285.14 KB 3adfc323d526ce1432df776a14e3a50b
ENCFF815YKG.tabix.bed.gz.tbi 158.4 KB 0a1d059218c1bdbdc74c69613401e8d9
genomic_resource.yaml 1.44 KB 1a3f2953ecf92a083d6073bb92f700da
statistics/