Resource

Id Histone_ChIP-seq/ENCSR421GENcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR421GEN [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR421GEN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (59 years)
  • date_created: 2020-05-01T02:54:40.144527+00:00
  • date_released: 2020-09-03
  • doi: 10.17989/ENCSR421GEN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR421GEN float

Histone_ChIP-seq_ENCSR421GEN
Histone_ChIP-seq ENCSR421GEN [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR421GEN [1.81, 45.9]
n
32,641,576
mean
15.5
sd
7.34

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 326415761.01% 21276
chr1 3225867 1.30% 2089
chr2 2244042 0.93% 1439
chr3 1895117 0.96% 1173
chr4 1343717 0.71% 815
chr5 1609644 0.89% 971
chr6 1901890 1.11% 1194
chr7 1609810 1.01% 1066
chr8 1274869 0.88% 800
chr9 1356299 0.98% 926
chr10 1444275 1.08% 928
chr11 1749741 1.30% 1121
chr12 1702472 1.28% 1046
chr13 686488 0.60% 431
chr14 1059629 0.99% 682
chr15 1057390 1.04% 707
chr16 1239703 1.37% 847
chr17 1867008 2.24% 1241
chr18 573558 0.71% 357
chr19 2010698 3.43% 1483
chr20 841760 1.31% 575
chr21 305187 0.65% 200
chr22 705135 1.39% 498
chrX 936640 0.60% 686
chrY 637 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 21276 248 9658 1534.2 1360
global segment-length histogram

Files

Filename Size md5
ENCFF370ZUG.bed.gz 560.57 KB ffd43b7f273a2e6e24c1e989f8c2908c
ENCFF370ZUG.tabix.bed.gz 246.3 KB e384b43b8e13a92a22b08ec3fdce61dc
ENCFF370ZUG.tabix.bed.gz.tbi 139.3 KB ee273fb36a1ed89758ce81d75be72d08
genomic_resource.yaml 1.75 KB 4b356bfda822cf61e52e0fdb3a38ee60
statistics/