Resource

Id Histone_ChIP-seq/ENCSR412THEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR412THE [biosample_summary="Homo sapiens heart left ventricle tissue male adult (54 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR412THE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (54 years)
  • date_created: 2021-08-25T18:07:49.973066+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR412THE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR412THE float

Histone_ChIP-seq_ENCSR412THE
Histone_ChIP-seq ENCSR412THE [biosample_summary="Homo sapiens heart left ventricle tissue male adult (54 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR412THE [1.63, 12.4]
n
180,265,140
mean
4.51
sd
1.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1802651405.60% 146592
chr1 17671961 7.10% 13923
chr2 15052259 6.21% 12045
chr3 13392255 6.75% 10598
chr4 7794447 4.10% 6602
chr5 10398454 5.73% 8564
chr6 10452156 6.12% 8726
chr7 8547917 5.36% 7428
chr8 8077951 5.57% 6762
chr9 7820393 5.65% 6225
chr10 10226402 7.64% 8019
chr11 9484878 7.02% 7540
chr12 9047255 6.79% 7222
chr13 4640479 4.06% 3805
chr14 5794486 5.41% 4620
chr15 6830905 6.70% 5379
chr16 5524530 6.12% 4555
chr17 8124277 9.76% 6334
chr18 3760403 4.68% 3263
chr19 5042144 8.60% 4228
chr20 4884456 7.58% 3852
chr21 1891035 4.05% 1629
chr22 3877276 7.63% 2979
chrX 1870856 1.20% 2202
chrY 57965 0.10% 92
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 146592 205 44167 1229.71 877
global segment-length histogram

Files

Filename Size md5
ENCFF543RIG.bed.gz 3.18 MB c43b223e1359c831058b9aa4f89d39c1
ENCFF543RIG.tabix.bed.gz 1.49 MB 9ea3212ba1d07cfc8d9cf2b849543fc1
ENCFF543RIG.tabix.bed.gz.tbi 332.51 KB 5432f43eff2191d6a83451ce9c97cbea
genomic_resource.yaml 1.53 KB cb6af2504763df820e0e148c401a906f
statistics/