Resource

Id Histone_ChIP-seq/ENCSR404HTGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR404HTG [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR404HTG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (41 years)
  • date_created: 2021-01-28T22:02:08.725078+00:00
  • date_released: 2022-02-05
  • doi: 10.17989/ENCSR404HTG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR404HTG float

Histone_ChIP-seq_ENCSR404HTG
Histone_ChIP-seq ENCSR404HTG [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR404HTG [1.52, 9.5]
n
89,370,871
mean
3.73
sd
1.13

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 893708712.78% 60561
chr1 9305712 3.74% 6007
chr2 6723435 2.78% 4985
chr3 5328820 2.69% 3858
chr4 2934603 1.54% 2340
chr5 4390013 2.42% 3124
chr6 3811420 2.23% 2733
chr7 3922712 2.46% 2814
chr8 2785902 1.92% 2101
chr9 3881614 2.80% 2556
chr10 3808657 2.85% 2708
chr11 4958944 3.67% 3126
chr12 5337076 4.00% 3318
chr13 1525111 1.33% 1261
chr14 3277461 3.06% 2202
chr15 3345416 3.28% 2354
chr16 4366333 4.83% 2649
chr17 5811603 6.98% 3430
chr18 1172219 1.46% 964
chr19 5051004 8.62% 3120
chr20 2900196 4.50% 1823
chr21 1071193 2.29% 736
chr22 2579684 5.08% 1437
chrX 1081743 0.69% 915
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60561 200 35501 1475.72 943
global segment-length histogram

Files

Filename Size md5
ENCFF946XSY.bed.gz 1.31 MB e83d8656c3ac4093de45b286e01786cf
ENCFF946XSY.tabix.bed.gz 635.75 KB 6297593c32dd4366df934ab060a4db0d
ENCFF946XSY.tabix.bed.gz.tbi 123.72 KB 3df9d95d804f5efa6c71977149aa08f4
genomic_resource.yaml 1.51 KB abe1ac60327a6baa0492e6b4ee0d89b8
statistics/