Resource

Id Histone_ChIP-seq/ENCSR400GCOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR400GCO [biosample_summary="Homo sapiens right lobe of liver tissue female adult (47 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR400GCO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (47 years)
  • date_created: 2022-05-11T01:53:57.087522+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR400GCO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (47 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR400GCO float

Histone_ChIP-seq_ENCSR400GCO
Histone_ChIP-seq ENCSR400GCO [biosample_summary="Homo sapiens right lobe of liver tissue female adult (47 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR400GCO [1.67, 9.85]
n
45,780,562
mean
3.92
sd
0.982

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 457805621.42% 44265
chr1 5131280 2.06% 4796
chr2 3443343 1.42% 3427
chr3 2862669 1.44% 2776
chr4 1629160 0.86% 1690
chr5 2327738 1.28% 2410
chr6 2053573 1.20% 2027
chr7 1971132 1.24% 1987
chr8 1399378 0.96% 1502
chr9 2115074 1.53% 1917
chr10 2097736 1.57% 2066
chr11 2634244 1.95% 2392
chr12 2862008 2.15% 2641
chr13 835127 0.73% 874
chr14 1731993 1.62% 1664
chr15 1616867 1.59% 1696
chr16 2143261 2.37% 1941
chr17 2794371 3.36% 2519
chr18 576187 0.72% 665
chr19 1959854 3.34% 1851
chr20 1333425 2.07% 1237
chr21 522379 1.12% 549
chr22 1334737 2.63% 1153
chrX 405026 0.26% 485
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44265 210 22618 1034.24 770
global segment-length histogram

Files

Filename Size md5
ENCFF191SKQ.bed.gz 935.17 KB ebd14748ac8da2ca263e5ad7121ca91d
ENCFF191SKQ.tabix.bed.gz 458.06 KB 742fe8fc4c1af4e4c7c0ffc56711c486
ENCFF191SKQ.tabix.bed.gz.tbi 110.96 KB 4393cae9845fd609856457fd8682a5b8
genomic_resource.yaml 1.54 KB 7586d1cd6af88eb5dee16f73e31c9067
statistics/