Histone_ChIP-seq_ENCSR397FAN
Histone_ChIP-seq ENCSR397FAN [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR397FAN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR397FAN [biosamplesummary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (16 weeks) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN723ABH|/analyses/ENCAN723ABH/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF875HGV|/files/ENCFF875HGV/} processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 15938668 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR397FAN | float |
Histone_ChIP-seq_ENCSR397FAN |
Histone_ChIP-seq ENCSR397FAN [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K4me1"]
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[2.08, 36.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF216GMF.bed.gz | 1.57 MB | c8fe3cb63f6f6a385bbb3aa4d825a080 |
| ENCFF216GMF.bed.gz.dvc | 101.0 B | 6f3e8ae09bce27817b68f8da8032e0a4 |
| ENCFF216GMF.tabix.bed.gz | 773.45 KB | 5a7836fdda50f0bd4078bdd49d974654 |
| ENCFF216GMF.tabix.bed.gz.dvc | 106.0 B | 6d1cfad35543f23356ec6dee6a708643 |
| ENCFF216GMF.tabix.bed.gz.tbi | 243.84 KB | 9d54ff3523466a10a54ac893bbd9da01 |
| ENCFF216GMF.tabix.bed.gz.tbi.dvc | 110.0 B | 6ebb8d5146e71144eaa7086d2c04016f |
| genomic_resource.yaml | 2.02 KB | 1c875ee6b6d9b2287f298d2a6ef2160b |
| genomic_resource_original.yaml | 1.87 KB | 50d89654226427090d46706003074d55 |
| statistics/ |