Histone_ChIP-seq_ENCSR395YXN
Histone_ChIP-seq ENCSR395YXN [biosample_summary="Homo sapiens T-cell male adult (37 years)" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR395YXN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR395YXN [biosamplesummary="Homo sapiens T-cell male adult (37 years)" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (37 years) output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN303EEG|/analyses/ENCAN303EEG/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF206QPZ|/files/ENCFF206QPZ/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.89. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR395YXN | float |
Histone_ChIP-seq_ENCSR395YXN |
Histone_ChIP-seq ENCSR395YXN [biosample_summary="Homo sapiens T-cell male adult (37 years)" and target="H3K4me3"]
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[1.92, 119] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF156WFR.bed.gz | 767.96 KB | 443fcdcd642969a1feecb096c074d5bd |
| ENCFF156WFR.bed.gz.dvc | 100.0 B | ed83b94b8e26466a38c0ddbbf61403f2 |
| ENCFF156WFR.tabix.bed.gz | 323.58 KB | 3ee99b81252b9835ed2dcb3d04e11572 |
| ENCFF156WFR.tabix.bed.gz.dvc | 106.0 B | d1f51993aa999fe3dfe421ae38d59ecb |
| ENCFF156WFR.tabix.bed.gz.tbi | 150.66 KB | c0ae65327399c0c8735b42e75ad2f190 |
| ENCFF156WFR.tabix.bed.gz.tbi.dvc | 110.0 B | fd1a908e688428dfe2eed631e6f8635a |
| genomic_resource.yaml | 2.1 KB | ad0b09941986ad406b9c321ee30a68fc |
| genomic_resource_original.yaml | 1.98 KB | 93c44a394d95ea83cf4d252233d41911 |
| statistics/ |