Resource

Id Histone_ChIP-seq/ENCSR393SYUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR393SYU [biosample_summary="Homo sapiens neutrophil" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR393SYU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000775/
  • biosample_summary: Homo sapiens neutrophil
  • date_created: 2016-11-04T14:33:40.164229+00:00
  • date_released: 2016-11-16
  • doi: 10.17989/ENCSR393SYU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR393SYU float

Histone_ChIP-seq_ENCSR393SYU
Histone_ChIP-seq ENCSR393SYU [biosample_summary="Homo sapiens neutrophil" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR393SYU [1.4, 56.7]
n
54,330,772
mean
16.6
sd
10.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 543307721.69% 34140
chr1 5562558 2.23% 3369
chr2 4032624 1.67% 2623
chr3 3072817 1.55% 2025
chr4 1887299 0.99% 1197
chr5 2464500 1.36% 1563
chr6 3121570 1.83% 1979
chr7 2446490 1.54% 1597
chr8 2021582 1.39% 1328
chr9 2195590 1.59% 1413
chr10 2435423 1.82% 1511
chr11 2883255 2.13% 1707
chr12 2859991 2.15% 1749
chr13 1041712 0.91% 707
chr14 1742224 1.63% 1113
chr15 1889288 1.85% 1188
chr16 2219333 2.46% 1361
chr17 3195533 3.84% 1914
chr18 830297 1.03% 588
chr19 3440164 5.87% 1984
chr20 1674508 2.60% 1103
chr21 677978 1.45% 442
chr22 1325787 2.61% 808
chrX 1264195 0.81% 845
chrY 46054 0.08% 26
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34140 220 23414 1591.41 1217.5
global segment-length histogram

Files

Filename Size md5
ENCFF974LQQ.bed.gz 876.03 KB a27303b2b13bce7508020c4be047a534
ENCFF974LQQ.tabix.bed.gz 385.47 KB d7c20eac5dd48364e3ccc477fa241ed9
ENCFF974LQQ.tabix.bed.gz.tbi 165.81 KB 92edd443f862b4532173a7f70aec51ef
genomic_resource.yaml 1.87 KB e033effaf00852b46a7958def3bdaff6
statistics/