Resource

Id Histone_ChIP-seq/ENCSR389SGOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR389SGO [biosample_summary="Homo sapiens angular gyrus tissue female adult (75 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR389SGO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002686/
  • biosample_summary: Homo sapiens angular gyrus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:24.950998+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR389SGO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR389SGO float

Histone_ChIP-seq_ENCSR389SGO
Histone_ChIP-seq ENCSR389SGO [biosample_summary="Homo sapiens angular gyrus tissue female adult (75 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR389SGO [1.8, 12.2]
n
4,579,000
mean
4.4
sd
1.07

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 45790000.14% 13520
chr1 260001 0.10% 782
chr2 281726 0.12% 869
chr3 209387 0.11% 672
chr4 228019 0.12% 708
chr5 299483 0.16% 884
chr6 184881 0.11% 594
chr7 231591 0.15% 715
chr8 160697 0.11% 510
chr9 154795 0.11% 464
chr10 196322 0.15% 566
chr11 161514 0.12% 514
chr12 229025 0.17% 636
chr13 83948 0.07% 279
chr14 102739 0.10% 331
chr15 124394 0.12% 330
chr16 143980 0.16% 404
chr17 94786 0.11% 281
chr18 88968 0.11% 283
chr19 638529 1.09% 1423
chr20 76080 0.12% 230
chr21 64456 0.14% 182
chr22 38143 0.08% 118
chrX 525536 0.34% 1745
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13520 170 3991 338.68 285
global segment-length histogram

Files

Filename Size md5
ENCFF046SQR.bed.gz 247.35 KB 715cd8dd0a93c241b0c96092ede34137
ENCFF046SQR.tabix.bed.gz 131.54 KB 1fcecf6e7ba7d483aaa992921f82804b
ENCFF046SQR.tabix.bed.gz.tbi 95.23 KB c91cf220a518e5a73216ae7dc62ce000
genomic_resource.yaml 1.51 KB 46ce5978c0497aca8d07e0946be1229a
statistics/