Histone_ChIP-seq_ENCSR389OFJ
Histone_ChIP-seq ENCSR389OFJ [biosample_summary="Homo sapiens chorionic villus tissue female embryo (40 weeks)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR389OFJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR389OFJ [biosamplesummary="Homo sapiens chorionic villus tissue female embryo (40 weeks)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (40 weeks) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN746SHM|/analyses/ENCAN746SHM/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF144DJW|/files/ENCFF144DJW/} processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 34851284 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR389OFJ | float |
Histone_ChIP-seq_ENCSR389OFJ |
Histone_ChIP-seq ENCSR389OFJ [biosample_summary="Homo sapiens chorionic villus tissue female embryo (40 weeks)" and target="H3K4me1"]
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[1.82, 13.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF412QVN.bed.gz | 2.0 MB | 98d4b804dab2752459f9072925cff878 |
| ENCFF412QVN.bed.gz.dvc | 101.0 B | 51d86afa5f47f6247a54c9c61c828c44 |
| ENCFF412QVN.tabix.bed.gz | 1021.03 KB | b5e5a2e5b989e62525aae8613d74b560 |
| ENCFF412QVN.tabix.bed.gz.dvc | 107.0 B | 5a57f6577b1e20aa3c04d0de83e724dc |
| ENCFF412QVN.tabix.bed.gz.tbi | 282.77 KB | e7679435cb00fe7e5d473b2d4bd9ab1f |
| ENCFF412QVN.tabix.bed.gz.tbi.dvc | 110.0 B | d7997fc41c425fd71e730aaf5b991c39 |
| genomic_resource.yaml | 2.03 KB | 47a858d6b856e8de55a3086282987741 |
| genomic_resource_original.yaml | 1.88 KB | 953641d2bcad2b6d1367967e1b5fc8cb |
| statistics/ |