Resource

Id Histone_ChIP-seq/ENCSR383CBNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR383CBN [biosample_summary="Homo sapiens IMR-90" and target="H3K18ac"]
Description
Labels
  • accession: ENCSR383CBN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001196/
  • biosample_summary: Homo sapiens IMR-90
  • date_created: 2015-10-01T07:15:56.580151+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR383CBN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K18ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR383CBN float

Histone_ChIP-seq_ENCSR383CBN
Histone_ChIP-seq ENCSR383CBN [biosample_summary="Homo sapiens IMR-90" and target="H3K18ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR383CBN [1.52, 25.4]
n
56,257,324
mean
5.48
sd
2.44

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 562573241.75% 171033
chr1 4773018 1.92% 14536
chr1_KI270713v1_random 188 0.46% 1
chr2 5656796 2.34% 16642
chr3 3976787 2.01% 12046
chr4 2974859 1.56% 9691
chr5 3681440 2.03% 11038
chr6 3654557 2.14% 11618
chr7 2787228 1.75% 8673
chr8 2977732 2.05% 9279
chr9 2589085 1.87% 7615
chr10 2540655 1.90% 7789
chr11 3251982 2.41% 9396
chr12 2848986 2.14% 8811
chr13 1602682 1.40% 5094
chr14 1822078 1.70% 5397
chr15 2171670 2.13% 6127
chr16 1296408 1.44% 3723
chr17 2003490 2.41% 5722
chr18 1341977 1.67% 4258
chr19 771255 1.32% 2567
chr20 1189867 1.85% 3512
chr21 823339 1.76% 2521
chr22 733148 1.44% 2167
chrUn_GL000195v1 533 0.29% 2
chrUn_GL000220v1 183 0.11% 1
chrX 787381 0.50% 2807
3340 contigs with no values (185919057 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 171033 120 5927 328.93 245
global segment-length histogram

Files

Filename Size md5
ENCFF275GFG.bed.gz 3.98 MB 92975f70c3334d5ddd36a636d51c4ec1
ENCFF275GFG.tabix.bed.gz 1.73 MB 449bd36dd3d7c136f74bd43b595f400f
ENCFF275GFG.tabix.bed.gz.tbi 309.48 KB 5af66b1ddf048dff0a539b7b97fd8084
genomic_resource.yaml 1.86 KB 7cd887010bc17f5be7c08c1eb3846ee9
statistics/