Resource

Id Histone_ChIP-seq/ENCSR381XDCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR381XDC [biosample_summary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR381XDC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002370/
  • biosample_summary: Homo sapiens thymus tissue female embryo (110 days)
  • date_created: 2015-09-16T21:43:01.123399+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR381XDC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (110 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR381XDC float

Histone_ChIP-seq_ENCSR381XDC
Histone_ChIP-seq ENCSR381XDC [biosample_summary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR381XDC [1.82, 53.5]
n
63,920,978
mean
14.7
sd
10.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 639209781.99% 77544
chr1 6715702 2.70% 8490
chr1_KI270712v1_random 564 0.32% 2
chr1_KI270713v1_random 3866 9.49% 7
chr2 4510265 1.86% 5552
chr3 2561245 1.29% 3021
chr4 2168374 1.14% 2223
chr5 3319757 1.83% 3981
chr6 3668021 2.15% 4311
chr7 3164306 1.99% 3595
chr8 2514600 1.73% 3076
chr9 3106631 2.24% 3798
chr10 3140890 2.35% 3994
chr11 3577863 2.65% 4462
chr12 2783534 2.09% 3143
chr13 1296352 1.13% 1624
chr14 1978431 1.85% 2429
chr15 1905202 1.87% 2448
chr16 2328101 2.58% 2840
chr17 4613098 5.54% 5408
chr17_GL000205v2_random 2821 1.52% 2
chr18 1058268 1.32% 1365
chr19 3544789 6.05% 3828
chr20 2306481 3.58% 3099
chr21 639769 1.37% 929
chr22 1813190 3.57% 2353
chr22_KI270733v1_random 822 0.46% 3
chrX 1198036 0.77% 1561
3339 contigs with no values (185722349 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77544 175 86621 824.32 388
global segment-length histogram

Files

Filename Size md5
ENCFF167GKG.bed.gz 1.51 MB f971394bd2f97d0ba22921d819b57331
ENCFF167GKG.tabix.bed.gz 767.55 KB d5ffea6c2f6f3146a90fbcbdda8d9875
ENCFF167GKG.tabix.bed.gz.tbi 163.85 KB ed38355305ab82f9b2ca450a7b6d07ba
genomic_resource.yaml 1.5 KB fdd239fe96e1567d74a76adf597881a5
statistics/