Resource

Id Histone_ChIP-seq/ENCSR378NGKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR378NGK [biosample_summary="Homo sapiens heart left ventricle tissue male adult (66 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR378NGK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (66 years)
  • date_created: 2021-08-25T18:07:41.172262+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR378NGK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (66 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR378NGK float

Histone_ChIP-seq_ENCSR378NGK
Histone_ChIP-seq ENCSR378NGK [biosample_summary="Homo sapiens heart left ventricle tissue male adult (66 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR378NGK [1.78, 10.8]
n
22,142,778
mean
4.51
sd
1.49

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 221427780.69% 29589
chr1 2171621 0.87% 3035
chr2 1602231 0.66% 1996
chr3 733590 0.37% 967
chr4 856358 0.45% 1028
chr5 1188087 0.65% 1433
chr6 1440332 0.84% 1748
chr7 1248859 0.78% 1531
chr8 923805 0.64% 1345
chr9 892177 0.64% 1180
chr10 1233217 0.92% 1601
chr11 938074 0.69% 1380
chr12 1079986 0.81% 1531
chr13 529797 0.46% 638
chr14 792806 0.74% 1062
chr15 623824 0.61% 856
chr16 786855 0.87% 1142
chr17 1461478 1.76% 1873
chr18 372904 0.46% 530
chr19 1303085 2.22% 1810
chr20 1047485 1.63% 1533
chr21 252200 0.54% 336
chr22 570933 1.12% 896
chrX 92526 0.06% 137
chrY 548 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29589 175 21459 748.34 490
global segment-length histogram

Files

Filename Size md5
ENCFF124GOU.bed.gz 515.65 KB 0fc42108878de3b69500029b055ce6e6
ENCFF124GOU.tabix.bed.gz 275.09 KB cdb84ead9ae3d47205a14a8852f06a68
ENCFF124GOU.tabix.bed.gz.tbi 109.09 KB 8048787aa3a428fef96ef83e3ef8a51a
genomic_resource.yaml 1.53 KB ea6fc41f43b969539a772165dee41f85
statistics/