Resource

Id Histone_ChIP-seq/ENCSR377MFDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR377MFD [biosample_summary="Homo sapiens temporal lobe tissue male adult (81 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR377MFD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001871/
  • biosample_summary: Homo sapiens temporal lobe tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:02.938605+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR377MFD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR377MFD float

Histone_ChIP-seq_ENCSR377MFD
Histone_ChIP-seq ENCSR377MFD [biosample_summary="Homo sapiens temporal lobe tissue male adult (81 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR377MFD [1.95, 14.7]
n
16,501,637
mean
4.88
sd
1.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 165016370.51% 26881
chr1 1075415 0.43% 1819
chr1_KI270709v1_random 506 0.76% 1
chr2 1210332 0.50% 2075
chr2_KI270716v1_random 870 0.57% 2
chr3 891613 0.45% 1582
chr4 1003251 0.53% 1721
chr4_GL000008v2_random 4429 2.11% 1
chr5 1205170 0.66% 1927
chr6 754782 0.44% 1371
chr7 976965 0.61% 1615
chr8 795889 0.55% 1341
chr9 608295 0.44% 1029
chr10 898266 0.67% 1460
chr11 761108 0.56% 1301
chr12 820947 0.62% 1291
chr13 443587 0.39% 791
chr14 473454 0.44% 825
chr14_GL000225v1_random 14523 6.88% 21
chr14_KI270722v1_random 7159 3.69% 10
chr14_KI270725v1_random 250 0.14% 1
chr15 404131 0.40% 652
chr16 525277 0.58% 846
chr17 336672 0.40% 548
chr17_GL000205v2_random 6021 3.24% 9
chr17_KI270729v1_random 20960 7.46% 31
chr17_KI270730v1_random 11197 9.95% 14
chr18 344079 0.43% 598
chr19 1634491 2.79% 2030
chr20 375460 0.58% 619
chr21 305962 0.66% 449
chr22 156724 0.31% 244
chr22_KI270732v1_random 764 1.84% 2
chr22_KI270735v1_random 1756 4.10% 2
chr22_KI270736v1_random 82438 45.32% 71
chr22_KI270738v1_random 2960 2.98% 6
chrUn_GL000214v1 647 0.47% 1
chrUn_GL000216v2 26277 14.88% 24
chrUn_GL000219v1 4646 2.59% 6
chrUn_GL000224v1 5560 3.09% 9
chrUn_KI270435v1 841 0.90% 2
chrUn_KI270438v1 7743 6.88% 8
chrUn_KI270442v1 45454 11.59% 45
chrUn_KI270511v1 329 4.05% 1
chrUn_KI270512v1 893 3.94% 1
chrUn_KI270519v1 757 0.55% 1
chrUn_KI270538v1 276 0.30% 1
chrUn_KI270589v1 2850 6.41% 1
chrUn_KI270590v1 1360 29.03% 1
chrUn_KI270591v1 965 16.65% 1
chrUn_KI270744v1 1263 0.75% 3
chrUn_KI270750v1 377 0.25% 1
chrUn_KI270751v1 1106 0.73% 1
chrUn_KI270756v1 1566 1.97% 2
chrUn_KI270757v1 3238 4.54% 3
chrX 160590 0.10% 342
chrY 79196 0.14% 122
3310 contigs with no values (124919177 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26881 245 23766 613.88 516
global segment-length histogram

Files

Filename Size md5
ENCFF991MBN.bed.gz 505.52 KB b310e3adb7c4d8281c930f0db5e3b087
ENCFF991MBN.tabix.bed.gz 264.36 KB 429cc34e26aba1e18ee580394b5c25e3
ENCFF991MBN.tabix.bed.gz.tbi 163.38 KB 75ad21e24a57a779146a9e3a8c12c7d8
genomic_resource.yaml 2.0 KB b43d18c179dbe8d7e1b887dc9efd8688
statistics/