Resource

Id Histone_ChIP-seq/ENCSR377FXGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR377FXG [biosample_summary="Homo sapiens foreskin keratinocyte male newborn" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR377FXG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001606/
  • biosample_summary: Homo sapiens foreskin keratinocyte male newborn
  • date_created: 2015-09-15T20:26:35.451942+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR377FXG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR377FXG float

Histone_ChIP-seq_ENCSR377FXG
Histone_ChIP-seq ENCSR377FXG [biosample_summary="Homo sapiens foreskin keratinocyte male newborn" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR377FXG [1.61, 22.3]
n
217,833,283
mean
6.53
sd
2.97

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2178332836.77% 158381
chr1 21823464 8.77% 15331
chr2 16567986 6.84% 13362
chr3 14082477 7.10% 10789
chr4 9418243 4.95% 8274
chr5 10953004 6.03% 8523
chr6 9622057 5.63% 8059
chr7 10272190 6.45% 7865
chr8 8148790 5.61% 6531
chr9 8822379 6.37% 6223
chr10 9454991 7.07% 6979
chr11 10990146 8.14% 7479
chr12 12192509 9.15% 8484
chr13 4462744 3.90% 4060
chr14 7563214 7.07% 5742
chr15 8038658 7.88% 6125
chr16 9433554 10.44% 5620
chr17 12474836 14.98% 7608
chr18 3826889 4.76% 3256
chr19 11509533 19.63% 5520
chr20 6225475 9.66% 3686
chr21 2476900 5.30% 1688
chr22 5562858 10.95% 3207
chrX 3640437 2.33% 3660
chrY 269949 0.47% 310
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 158381 195 69544 1375.38 694
global segment-length histogram

Files

Filename Size md5
ENCFF725ZGQ.bed.gz 3.43 MB db70f76282a79fbcb2731ac16bbc3b57
ENCFF725ZGQ.tabix.bed.gz 1.61 MB 314a9eff83bfe8199679b94f25fdbd0e
ENCFF725ZGQ.tabix.bed.gz.tbi 165.33 KB f0bad188c89b017eae26e1ea5fa519aa
genomic_resource.yaml 1.47 KB db80daa6d6614784fdd1bd08e32a75cf
statistics/