Histone_ChIP-seq_ENCSR374RZR
Histone_ChIP-seq ENCSR374RZR [biosample_summary="Homo sapiens MCF-7" and target="H3K9me2"]
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| Id: | Histone_ChIP-seq/ENCSR374RZR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR374RZR [biosamplesummary="Homo sapiens MCF-7" and target="H3K9me2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN579WOJ|/analyses/ENCAN579WOJ/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN579WOJ|/analyses/ENCAN579WOJ/} has in progress subobject document {c8f1146d-d68a-4506-822a-ede4f0d34e2a|/documents/c8f1146d-d68a-4506-822a-ede4f0d34e2a/} audit_not_compliant: Processed alignments file {ENCFF418SFP|/files/ENCFF418SFP/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 15152718 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me2-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF249TCH|/files/ENCFF249TCH/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 21241620 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me2-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR374RZR | float |
Histone_ChIP-seq_ENCSR374RZR |
Histone_ChIP-seq ENCSR374RZR [biosample_summary="Homo sapiens MCF-7" and target="H3K9me2"]
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[1.41, 5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF538BHD.bed.gz | 21.56 KB | d338de459a8be8a24dabface9ec8efc3 |
| ENCFF538BHD.bed.gz.dvc | 99.0 B | adda2282787cf5b441467364c282db7f |
| ENCFF538BHD.tabix.bed.gz | 9.95 KB | e660c6d69e08ce87e389a0d8dd45b458 |
| ENCFF538BHD.tabix.bed.gz.dvc | 105.0 B | 0f79b8df6ba944f7995c79472b74c883 |
| ENCFF538BHD.tabix.bed.gz.tbi | 12.28 KB | 559e4b087eae5d01e2b471dd01579197 |
| ENCFF538BHD.tabix.bed.gz.tbi.dvc | 109.0 B | 786fbb58754244c6509b5869b64804a3 |
| genomic_resource.yaml | 2.61 KB | eb53518588c08d58632fdf0d0a64316b |
| genomic_resource_original.yaml | 2.5 KB | 201fd2beb0bede473780a9713c35e90d |
| statistics/ |