Resource

Id Histone_ChIP-seq/ENCSR374JBScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR374JBS [biosample_summary="Homo sapiens BLaER1 9 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR374JBS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 9 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:06.473391+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR374JBS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 9 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR374JBS float

Histone_ChIP-seq_ENCSR374JBS
Histone_ChIP-seq ENCSR374JBS [biosample_summary="Homo sapiens BLaER1 9 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR374JBS [1.18, 45.6]
n
115,484,326
mean
9.77
sd
8.27

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1154843263.59% 66413
chr1 3496077 1.40% 2271
chr1_KI270709v1_random 1243 1.86% 3
chr1_KI270712v1_random 26247 14.91% 19
chr1_KI270713v1_random 8586 21.07% 6
chr1_KI270714v1_random 8179 19.61% 13
chr2 2528160 1.04% 1525
chr3 1459727 0.74% 964
chr4 1055043 0.55% 682
chr4_GL000008v2_random 274 0.13% 1
chr5 1531341 0.84% 899
chr6 1803064 1.06% 1118
chr7 1631047 1.02% 1044
chr8 1545379 1.06% 1052
chr9 1445809 1.04% 917
chr9_KI270717v1_random 1274 3.18% 2
chr10 1717800 1.28% 1132
chr11 1877958 1.39% 1142
chr12 1731453 1.30% 947
chr13 714659 0.62% 409
chr14 901978 0.84% 549
chr14_GL000225v1_random 301 0.14% 1
chr15 1169579 1.15% 706
chr16 1360398 1.51% 858
chr16_KI270728v1_random 250 0.01% 1
chr17 2441541 2.93% 1445
chr17_KI270729v1_random 781 0.28% 2
chr18 452971 0.56% 338
chr19 1556088 2.65% 949
chr20 1086107 1.69% 644
chr21 397761 0.85% 326
chr22 947351 1.86% 624
chr22_KI270733v1_random 4258 2.37% 6
chr22_KI270736v1_random 260 0.14% 1
chr22_KI270738v1_random 250 0.25% 1
chrUn_GL000216v2 349 0.20% 1
chrUn_GL000219v1 280 0.16% 1
chrUn_GL000220v1 1770 1.09% 2
chrUn_KI270438v1 4077 3.62% 7
chrUn_KI270442v1 353 0.09% 1
chrUn_KI270744v1 5283 3.14% 6
chrUn_KI270747v1 250 0.13% 1
chrUn_KI270756v1 275 0.35% 1
chrX 82561649 52.91% 45777
chrY 6846 0.01% 19
3322 contigs with no values (124207140 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66413 250 142620 1738.88 747
global segment-length histogram

Files

Filename Size md5
ENCFF828RUG.bed.gz 1.35 MB d6b8456beccf730db9ea406200f5385c
ENCFF828RUG.tabix.bed.gz 660.58 KB 0c67b586e3908a0ae1c0118ec76a4551
ENCFF828RUG.tabix.bed.gz.tbi 106.44 KB 8738f17ffc2962707393d00fb7bb6dc1
genomic_resource.yaml 3.12 KB 467eca1aef185c5bba10c61b44c74b67
statistics/