Resource

Id Histone_ChIP-seq/ENCSR372OTDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR372OTD [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR372OTD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue adult (59 years)
  • date_created: 2015-09-15T20:27:25.892762+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR372OTD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR372OTD float

Histone_ChIP-seq_ENCSR372OTD
Histone_ChIP-seq ENCSR372OTD [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR372OTD [2.19, 12.4]
n
20,113,193
mean
5.37
sd
1.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 201131930.63% 58193
chr1 2266853 0.91% 6408
chr1_KI270711v1_random 1531 3.63% 1
chr2 1572928 0.65% 4650
chr3 1320494 0.67% 3888
chr4 781518 0.41% 2357
chr5 1059060 0.58% 3086
chr6 955691 0.56% 2781
chr7 874073 0.55% 2594
chr8 649402 0.45% 1999
chr9 862312 0.62% 2500
chr10 901889 0.67% 2596
chr11 1059710 0.78% 2957
chr12 1239586 0.93% 3456
chr13 385340 0.34% 1203
chr14 780690 0.73% 2234
chr15 747530 0.73% 2231
chr16 828170 0.92% 2352
chr17 1172811 1.41% 3302
chr18 282064 0.35% 874
chr19 1032015 1.76% 2758
chr20 565199 0.88% 1624
chr21 205307 0.44% 620
chr22 445056 0.88% 1279
chrX 123964 0.08% 443
3342 contigs with no values (186262290 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58193 160 4283 345.63 280
global segment-length histogram

Files

Filename Size md5
ENCFF267LPH.bed.gz 931.45 KB 71733435aa4fd25356c14fe91bcdae07
ENCFF267LPH.tabix.bed.gz 510.12 KB 49c9b64e08bc9754185b97a793a2ebb2
ENCFF267LPH.tabix.bed.gz.tbi 148.02 KB 8fd493b09a8202a31526bbff6f3c13fb
genomic_resource.yaml 1.99 KB e63e1bd827ed0948f0504549b44149c9
statistics/