Resource

Id Histone_ChIP-seq/ENCSR371LUAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR371LUA [biosample_summary="Homo sapiens BLaER1 120 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR371LUA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 120 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:16.022168+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR371LUA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 120 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR371LUA float

Histone_ChIP-seq_ENCSR371LUA
Histone_ChIP-seq ENCSR371LUA [biosample_summary="Homo sapiens BLaER1 120 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR371LUA [1.59, 21.1]
n
280,869,523
mean
6.72
sd
3.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2808695238.73% 238428
chr1 26745929 10.74% 22083
chr1_KI270711v1_random 250 0.59% 1
chr1_KI270712v1_random 329 0.19% 1
chr1_KI270713v1_random 4648 11.41% 7
chr2 22240498 9.18% 19282
chr3 17401862 8.78% 15181
chr3_GL000221v1_random 664 0.43% 2
chr4 12104361 6.36% 11478
chr4_GL000008v2_random 250 0.12% 1
chr5 15030736 8.28% 13180
chr6 15610922 9.14% 13775
chr7 14043503 8.81% 12786
chr8 13999334 9.65% 11260
chr9 11807457 8.53% 10136
chr9_KI270718v1_random 582 1.53% 2
chr10 13939533 10.42% 11678
chr11 14192545 10.51% 11355
chr12 13987426 10.50% 11756
chr13 6167935 5.39% 6029
chr14 9122369 8.52% 7476
chr14_GL000194v1_random 1385 0.72% 2
chr14_KI270723v1_random 1849 4.85% 2
chr14_KI270725v1_random 378 0.22% 1
chr15 9633330 9.45% 7670
chr15_KI270727v1_random 1186 0.26% 3
chr16 10654334 11.79% 8472
chr16_KI270728v1_random 2249 0.12% 4
chr17 14155538 17.00% 10707
chr17_GL000205v2_random 26998 14.55% 21
chr18 5478403 6.82% 4988
chr19 10165593 17.34% 7694
chr20 8533943 13.24% 6791
chr21 3710685 7.94% 3119
chr22 6078555 11.96% 4834
chr22_KI270731v1_random 2676 1.78% 4
chr22_KI270733v1_random 1991 1.11% 4
chr22_KI270734v1_random 556 0.34% 2
chr22_KI270735v1_random 2187 5.11% 3
chrUn_GL000195v1 4876 2.67% 10
chrUn_GL000214v1 252 0.18% 1
chrUn_GL000216v2 414 0.23% 1
chrUn_GL000219v1 17540 9.79% 18
chrUn_GL000220v1 579 0.36% 2
chrUn_GL000224v1 845 0.47% 2
chrUn_KI270519v1 653 0.47% 1
chrUn_KI270579v1 250 0.81% 1
chrUn_KI270742v1 504 0.27% 2
chrUn_KI270744v1 5338 3.17% 5
chrUn_KI270745v1 256 0.61% 1
chrUn_KI270746v1 967 1.45% 2
chrUn_KI270753v1 4172 6.63% 5
chrUn_KI270755v1 887 2.42% 1
chrX 5976552 3.83% 6581
chrY 2469 <0.01% 5
3312 contigs with no values (123217219 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 238428 250 50757 1178.01 701
global segment-length histogram

Files

Filename Size md5
ENCFF840FTK.bed.gz 5.19 MB 112a008eb93ee583eeb55d09506c9481
ENCFF840FTK.tabix.bed.gz 2.39 MB e59b39a778aa52f2e4d7d31e4f758024
ENCFF840FTK.tabix.bed.gz.tbi 458.52 KB 78a68fe827cf10c82ab43ff5ce939e6c
genomic_resource.yaml 3.12 KB cb0f7d36ee8d91be8aa2d98f38979781
statistics/