Resource

Id Histone_ChIP-seq/ENCSR368YPCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR368YPC [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR368YPC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (32 years)
  • date_created: 2015-09-15T20:26:53.849220+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR368YPC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (32 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR368YPC float

Histone_ChIP-seq_ENCSR368YPC
Histone_ChIP-seq ENCSR368YPC [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR368YPC [1.96, 58.7]
n
32,629,360
mean
22.1
sd
11.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 326293601.01% 23864
chr1 3329615 1.34% 2458
chr2 2221979 0.92% 1582
chr3 1783863 0.90% 1282
chr4 1185917 0.62% 849
chr5 1530348 0.84% 1054
chr6 1919887 1.12% 1354
chr7 1551054 0.97% 1181
chr8 1119569 0.77% 808
chr9 1301893 0.94% 975
chr10 1368024 1.02% 992
chr11 1790511 1.33% 1222
chr12 1732120 1.30% 1212
chr13 668232 0.58% 488
chr14 1116068 1.04% 817
chr15 1027894 1.01% 757
chr16 1304503 1.44% 982
chr17 2046446 2.46% 1445
chr18 508320 0.63% 392
chr19 2181192 3.72% 1699
chr20 848700 1.32% 652
chr21 339208 0.73% 258
chr22 769440 1.51% 587
chrX 946688 0.61% 791
chrY 37889 0.07% 27
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23864 210 12737 1367.3 1165
global segment-length histogram

Files

Filename Size md5
ENCFF556EBC.bed.gz 599.81 KB f68a134242ae61f34d00c439d6a898c3
ENCFF556EBC.tabix.bed.gz 269.25 KB 4e7d59fb4731ebd348241fcfd874e218
ENCFF556EBC.tabix.bed.gz.tbi 146.7 KB 6f826bf2730d8fcbc383d5379c3ea9cb
genomic_resource.yaml 2.04 KB 11b8c1e66d872a5bb3be1ef06e87af1c
statistics/