Resource

Id Histone_ChIP-seq/ENCSR368ORVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR368ORV [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR368ORV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006631/
  • biosample_summary: Homo sapiens right atrium auricular region tissue female adult (53 years)
  • date_created: 2017-01-24T04:33:50.779749+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR368ORV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR368ORV float

Histone_ChIP-seq_ENCSR368ORV
Histone_ChIP-seq ENCSR368ORV [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR368ORV [1.43, 6.41]
n
387,853
mean
3.2
sd
0.585

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3878530.01% 1457
chr1 39511 0.02% 151
chr1_KI270712v1_random 228 0.13% 1
chr2 29223 0.01% 113
chr3 22158 0.01% 85
chr4 12941 0.01% 52
chr5 16570 0.01% 67
chr6 19703 0.01% 82
chr7 13093 0.01% 54
chr8 18296 0.01% 71
chr9 16898 0.01% 63
chr10 19250 0.01% 76
chr11 19890 0.01% 68
chr12 17039 0.01% 64
chr13 9673 0.01% 42
chr14 13299 0.01% 47
chr15 10417 0.01% 39
chr16 14930 0.02% 56
chr17 23069 0.03% 82
chr18 9009 0.01% 36
chr19 16009 0.03% 57
chr20 11583 0.02% 46
chr21 4954 0.01% 21
chr22 9416 0.02% 37
chrM 10587 63.90% 9
chrUn_KI270438v1 420 0.37% 1
chrUn_KI270466v1 240 19.46% 1
chrUn_KI270467v1 1115 28.44% 2
chrX 8332 0.01% 34
3338 contigs with no values (185994230 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1457 135 4790 266.2 237
global segment-length histogram

Files

Filename Size md5
ENCFF052PPU.bed.gz 28.76 KB 65f0241cf16d26d94f40674af64faa99
ENCFF052PPU.tabix.bed.gz 15.23 KB 4d4af714297efd5f4e7bdcd145332409
ENCFF052PPU.tabix.bed.gz.tbi 19.69 KB 5154e3c293df40f3f5c8ff2fb814fc1a
genomic_resource.yaml 1.57 KB 5bb52400136463aadce9162189b98501
statistics/