Resource

Id Histone_ChIP-seq/ENCSR368APTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR368APT [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR368APT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue female adult (59 years)
  • date_created: 2021-01-28T22:01:52.955670+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR368APT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR368APT float

Histone_ChIP-seq_ENCSR368APT
Histone_ChIP-seq ENCSR368APT [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR368APT [1.61, 12.2]
n
54,490,490
mean
4.45
sd
1.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 544904901.69% 52944
chr1 3395324 1.36% 3451
chr2 3974373 1.64% 4231
chr3 3368502 1.70% 3607
chr4 3545754 1.86% 3733
chr5 3707581 2.04% 3714
chr6 2690794 1.58% 2932
chr7 3272376 2.05% 3223
chr8 2904110 2.00% 2792
chr9 1859138 1.34% 1803
chr10 2227386 1.66% 2208
chr11 2342918 1.73% 2275
chr12 2837979 2.13% 2507
chr13 1536356 1.34% 1759
chr14 1499404 1.40% 1590
chr15 1305706 1.28% 1277
chr16 1442501 1.60% 1269
chr17 855548 1.03% 796
chr18 1120212 1.39% 1219
chr19 5372244 9.16% 2813
chr20 849129 1.32% 900
chr21 669064 1.43% 776
chr22 539052 1.06% 547
chrX 3175039 2.03% 3522
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52944 200 56428 1029.21 756
global segment-length histogram

Files

Filename Size md5
ENCFF082HMC.bed.gz 1.04 MB dc5f961b68d8c8fa6fe58fbb0e8ded9c
ENCFF082HMC.tabix.bed.gz 541.82 KB 45d6ff0aca07bd374153dba17fb7e254
ENCFF082HMC.tabix.bed.gz.tbi 252.96 KB a5dee4ded41ab82b61caafae3d81d1ce
genomic_resource.yaml 1.55 KB 941733c5e7185280978c2f7fd859f6f4
statistics/