Resource

Id Histone_ChIP-seq/ENCSR366AOJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR366AOJ [biosample_summary="Homo sapiens kidney tissue female embryo (120 days)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR366AOJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002113/
  • biosample_summary: Homo sapiens kidney tissue female embryo (120 days)
  • date_created: 2015-09-15T19:52:19.600656+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR366AOJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (120 days)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR366AOJ float

Histone_ChIP-seq_ENCSR366AOJ
Histone_ChIP-seq ENCSR366AOJ [biosample_summary="Homo sapiens kidney tissue female embryo (120 days)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR366AOJ [2.06, 15.5]
n
11,941,047
mean
4.32
sd
1.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 119410470.37% 38301
chr1 1236688 0.50% 4049
chr2 936088 0.39% 3084
chr3 708732 0.36% 2329
chr4 495733 0.26% 1664
chr5 616901 0.34% 2040
chr6 546668 0.32% 1779
chr7 531336 0.33% 1733
chr8 361021 0.25% 1213
chr9 521061 0.38% 1658
chr10 472731 0.35% 1592
chr11 576318 0.43% 1837
chr12 700308 0.53% 2201
chr13 258883 0.23% 867
chr14 418269 0.39% 1362
chr15 442606 0.43% 1463
chr16 490449 0.54% 1544
chr17 641265 0.77% 2024
chr18 189796 0.24% 629
chr19 905337 1.54% 2326
chr20 331785 0.51% 1077
chr21 147437 0.32% 464
chr22 235412 0.46% 774
chrX 175939 0.11% 591
chrY 284 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38301 170 3587 311.77 259
global segment-length histogram

Files

Filename Size md5
ENCFF839LUB.bed.gz 661.97 KB 7a3fb277849a3f465cbdd6ed4e99aa46
ENCFF839LUB.tabix.bed.gz 362.32 KB c5eecc58d07831aa21682b74f441134f
ENCFF839LUB.tabix.bed.gz.tbi 131.42 KB 677f28edd59cb16eaf7b549755b3dfe7
genomic_resource.yaml 1.99 KB c32e09dc3809095154387363176509d5
statistics/