Resource

Id Histone_ChIP-seq/ENCSR364YAYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR364YAY [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR364YAY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue male adult (54 years)
  • date_created: 2017-12-06T21:00:21.683106+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR364YAY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR364YAY float

Histone_ChIP-seq_ENCSR364YAY
Histone_ChIP-seq ENCSR364YAY [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR364YAY [1.34, 6.49]
n
8,514,488
mean
2.94
sd
0.592

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 85144880.26% 9858
chr1 1065093 0.43% 1205
chr2 697502 0.29% 842
chr3 589388 0.30% 719
chr4 381151 0.20% 479
chr5 520322 0.29% 615
chr6 439859 0.26% 523
chr7 301950 0.19% 345
chr8 237825 0.16% 296
chr9 399669 0.29% 450
chr10 388207 0.29% 454
chr11 423218 0.31% 494
chr12 508778 0.38% 604
chr13 181445 0.16% 216
chr14 343205 0.32% 422
chr15 336493 0.33% 420
chr16 255416 0.28% 291
chr17 347744 0.42% 387
chr18 123291 0.15% 161
chr19 610257 1.04% 501
chr20 175702 0.27% 212
chr21 85421 0.18% 103
chr22 89701 0.18% 102
chrX 8550 0.01% 12
chrY 4301 0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9858 370 6782 863.71 710.5
global segment-length histogram

Files

Filename Size md5
ENCFF890UNK.bed.gz 196.25 KB b77af07fbf0071ce1ff800d51f473226
ENCFF890UNK.tabix.bed.gz 102.43 KB 02a06c120770d0095d31b47eed1b2a15
ENCFF890UNK.tabix.bed.gz.tbi 55.02 KB c575bc602f637ad1f363469fff4974b9
genomic_resource.yaml 1.55 KB 259f3ca96a57460631d8a48791d6f2b9
statistics/