Resource

Id Histone_ChIP-seq/ENCSR361FWQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR361FWQ [biosample_summary="Homo sapiens MM.1S" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR361FWQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-02-20T05:14:05.095375+00:00
  • date_released: 2016-05-06
  • doi: 10.17989/ENCSR361FWQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR361FWQ float

Histone_ChIP-seq_ENCSR361FWQ
Histone_ChIP-seq ENCSR361FWQ [biosample_summary="Homo sapiens MM.1S" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR361FWQ [1.39, 39.1]
n
44,834,750
mean
12.7
sd
7.14

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 448347501.39% 40268
chr1 4355818 1.75% 3821
chr2 3437740 1.42% 3055
chr3 2804896 1.41% 2493
chr4 2086812 1.10% 1859
chr5 2420610 1.33% 2090
chr6 2791170 1.63% 2421
chr7 2247291 1.41% 2103
chr8 1751491 1.21% 1623
chr9 1723958 1.25% 1608
chr10 1950609 1.46% 1747
chr11 2322119 1.72% 2005
chr12 2402786 1.80% 2084
chr13 890577 0.78% 848
chr14 1168669 1.09% 1126
chr15 1504176 1.47% 1314
chr16 1569934 1.74% 1463
chr17 2351639 2.82% 2093
chr18 843723 1.05% 785
chr19 2085725 3.56% 1913
chr20 1211910 1.88% 1133
chr21 539726 1.16% 505
chr22 951979 1.87% 853
chrX 1420924 0.91% 1325
chrY 468 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40268 195 19906 1113.41 827
global segment-length histogram

Files

Filename Size md5
ENCFF049NAQ.bed.gz 1.07 MB e27735c96b9225c13c3ed6a02122e7f4
ENCFF049NAQ.tabix.bed.gz 458.91 KB 352a129a5182bb1682895e7385d17a28
ENCFF049NAQ.tabix.bed.gz.tbi 209.95 KB 751c9adbfaa6e8d0c824c18187b24526
genomic_resource.yaml 1.36 KB a79718f05a2fcb7480aedf9e5b15b0ac
statistics/