Resource

Id Histone_ChIP-seq/ENCSR356ANCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR356ANC [biosample_summary="Homo sapiens lung tissue female adult (30 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR356ANC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue female adult (30 years)
  • date_created: 2015-10-01T07:17:11.512444+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR356ANC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR356ANC float

Histone_ChIP-seq_ENCSR356ANC
Histone_ChIP-seq ENCSR356ANC [biosample_summary="Homo sapiens lung tissue female adult (30 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR356ANC [1.87, 22.8]
n
53,772,003
mean
6.43
sd
2.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 537720031.67% 133010
chr1 5129271 2.06% 12553
chr1_KI270709v1_random 255 0.38% 1
chr1_KI270712v1_random 781 0.44% 3
chr2 4309215 1.78% 11020
chr3 3076195 1.55% 7899
chr4 1512892 0.80% 4156
chr5 2415376 1.33% 6345
chr6 2388150 1.40% 6567
chr7 2402593 1.51% 6242
chr8 2146540 1.48% 5568
chr9 2619819 1.89% 6106
chr9_KI270718v1_random 442 1.16% 1
chr10 3059331 2.29% 7391
chr11 3193665 2.36% 7518
chr12 2231466 1.67% 5611
chr13 1092458 0.96% 2992
chr14 1868940 1.75% 4569
chr14_GL000194v1_random 238 0.12% 1
chr14_GL000225v1_random 140 0.07% 1
chr15 1917255 1.88% 4796
chr16 2490230 2.76% 5720
chr17 3314559 3.98% 7400
chr17_GL000205v2_random 2513 1.35% 4
chr18 1023910 1.27% 2899
chr19 2718182 4.64% 5791
chr20 1803342 2.80% 4441
chr21 667132 1.43% 1724
chr22 1768112 3.48% 3876
chr22_KI270733v1_random 154 0.09% 1
chrUn_GL000219v1 1441 0.80% 3
chrUn_KI270442v1 845 0.22% 2
chrX 616561 0.40% 1809
3334 contigs with no values (184684279 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 133010 140 6694 404.27 316
global segment-length histogram

Files

Filename Size md5
ENCFF293GFV.bed.gz 2.41 MB 0447e3dc2c6411e9f1a3406d95eeb433
ENCFF293GFV.tabix.bed.gz 1.22 MB 37d2580ceb683189a6eaebc30274136b
ENCFF293GFV.tabix.bed.gz.tbi 353.39 KB f829b9b1809d2aee029eecb99510125a
genomic_resource.yaml 1.97 KB c1060891e283261e987668ba608cca88
statistics/