Resource

Id Histone_ChIP-seq/ENCSR355XNFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR355XNF [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR355XNF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:16.819954+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR355XNF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR355XNF float

Histone_ChIP-seq_ENCSR355XNF
Histone_ChIP-seq ENCSR355XNF [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR355XNF [1.5, 20.9]
n
278,795,633
mean
6.67
sd
2.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2787956338.67% 166052
chr1 25695811 10.32% 15096
chr2 22346934 9.23% 13323
chr3 17863159 9.01% 10885
chr4 12782518 6.72% 8245
chr5 15396093 8.48% 9217
chr6 16100920 9.43% 9769
chr7 13669513 8.58% 8642
chr8 14072774 9.70% 8405
chr9 11577252 8.37% 6935
chr10 13920345 10.40% 8100
chr11 14167352 10.49% 8079
chr12 14117994 10.59% 8328
chr13 6348976 5.55% 4205
chr14 9225209 8.62% 5303
chr15 9490999 9.31% 5284
chr16 9991172 11.06% 5638
chr17 13437111 16.14% 7313
chr18 5619560 6.99% 3533
chr19 9471660 16.16% 5391
chr20 8340746 12.94% 4661
chr21 3477202 7.44% 2061
chr22 5596913 11.01% 3249
chrX 6085420 3.90% 4390
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 166052 230 57267 1678.97 1154
global segment-length histogram

Files

Filename Size md5
ENCFF203EXC.bed.gz 4.26 MB 374c62167d6c2a68211239cba477d9b4
ENCFF203EXC.tabix.bed.gz 1.79 MB e2efabfb465c7e5b008888eccf9cf9d6
ENCFF203EXC.tabix.bed.gz.tbi 397.25 KB 7a8b0bef08fab3aab1ac76b510f26c96
genomic_resource.yaml 2.32 KB 8ee2e3ad6fcf17bbcabd639bb50b80bb
statistics/