Resource

Id Histone_ChIP-seq/ENCSR354ISTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR354IST [biosample_summary="Homo sapiens stomach tissue female embryo (96 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR354IST
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue female embryo (96 days)
  • date_created: 2015-09-16T21:42:21.760411+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR354IST
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (96 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR354IST float

Histone_ChIP-seq_ENCSR354IST
Histone_ChIP-seq ENCSR354IST [biosample_summary="Homo sapiens stomach tissue female embryo (96 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR354IST [1.98, 107]
n
90,075,016
mean
14.8
sd
16.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 900750162.80% 131234
chr1 9425145 3.79% 13053
chr2 5786771 2.39% 8917
chr3 3063951 1.55% 4792
chr4 2514190 1.32% 3061
chr5 3823074 2.11% 5394
chr6 3521974 2.06% 5396
chr7 3743935 2.35% 5255
chr8 3508330 2.42% 4952
chr9 3743007 2.70% 4842
chr10 4834337 3.61% 7434
chr11 5311106 3.93% 7763
chr12 3786126 2.84% 5562
chr13 1584817 1.39% 2380
chr14 2571428 2.40% 3738
chr15 2665785 2.61% 4282
chr16 3943666 4.37% 5534
chr17 5952323 7.15% 7496
chr18 1410300 1.75% 2365
chr19 4623126 7.89% 5440
chr20 3980932 6.18% 5819
chr21 1091694 2.34% 1706
chr22 3450138 6.79% 4722
chrX 5738861 3.68% 11331
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 131234 185 59658 686.37 430
global segment-length histogram

Files

Filename Size md5
ENCFF765MFS.bed.gz 2.4 MB fd34729526cae869d4f54b85d2a09c10
ENCFF765MFS.tabix.bed.gz 1.2 MB 705d7b8a1208d73249723acb0800d299
ENCFF765MFS.tabix.bed.gz.tbi 251.28 KB 31ccff8ebf4b779dc5f0ab3eef4e76a1
genomic_resource.yaml 2.2 KB 4e56181ba2d92490d6dac58454a63e28
statistics/