Resource

Id Histone_ChIP-seq/ENCSR353MNVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR353MNV [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR353MNV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue male adult (37 years)
  • date_created: 2019-08-14T04:37:36.636634+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR353MNV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR353MNV float

Histone_ChIP-seq_ENCSR353MNV
Histone_ChIP-seq ENCSR353MNV [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR353MNV [1.51, 29.8]
n
230,473,808
mean
7.09
sd
3.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2304738087.16% 99810
chr1 22120989 8.89% 9271
chr1_KI270709v1_random 442 0.66% 1
chr1_KI270711v1_random 2731 6.47% 3
chr2 18168644 7.50% 8371
chr3 14917223 7.52% 6769
chr4 10003004 5.26% 4910
chr5 11174929 6.16% 5025
chr6 10774188 6.31% 5124
chr7 10954112 6.87% 5308
chr8 8105818 5.58% 3913
chr9 10621198 7.67% 4600
chr10 10615652 7.93% 4806
chr11 11440606 8.47% 4487
chr12 12334218 9.25% 4840
chr13 5215713 4.56% 2657
chr14 8037669 7.51% 3387
chr15 8729822 8.56% 3778
chr16 9422864 10.43% 3322
chr17 12201007 14.65% 4680
chr17_GL000205v2_random 783 0.42% 1
chr18 4161902 5.18% 2150
chr19 12196011 20.81% 3807
chr20 6625084 10.28% 2542
chr21 2558384 5.48% 957
chr22 5462124 10.75% 2006
chr22_KI270732v1_random 638 1.54% 1
chrUn_GL000195v1 564 0.31% 1
chrUn_GL000219v1 13654 7.62% 11
chrX 4377245 2.81% 2905
chrY 236590 0.41% 177
3336 contigs with no values (128378787 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99810 235 110367 2309.13 1144
global segment-length histogram

Files

Filename Size md5
ENCFF531DOT.bed.gz 2.26 MB 5627c47f18d6f46924cb845056889a6f
ENCFF531DOT.tabix.bed.gz 1.03 MB c399a7ea1b66655bc3889f4607fd7894
ENCFF531DOT.tabix.bed.gz.tbi 159.89 KB ae2de29caf4f2dd5dffd8c89db3cadf4
genomic_resource.yaml 1.55 KB e2181df4f1d48d6ba2e02d46cbac65c3
statistics/