Resource

Id Histone_ChIP-seq/ENCSR352BOScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR352BOS [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR352BOS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue female child (16 years)
  • date_created: 2021-01-28T22:01:58.547361+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR352BOS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR352BOS float

Histone_ChIP-seq_ENCSR352BOS
Histone_ChIP-seq ENCSR352BOS [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR352BOS [1.69, 7.87]
n
27,583,812
mean
3.61
sd
0.827

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 275838120.86% 43571
chr1 2906029 1.17% 4500
chr2 2114758 0.87% 3458
chr3 1791150 0.90% 2922
chr4 894274 0.47% 1530
chr5 1305282 0.72% 2133
chr6 1378235 0.81% 2332
chr7 1136378 0.71% 1879
chr8 1052722 0.73% 1738
chr9 1305654 0.94% 2019
chr10 1472872 1.10% 2271
chr11 1611906 1.19% 2505
chr12 1385515 1.04% 2170
chr13 505166 0.44% 888
chr14 950834 0.89% 1498
chr15 1078296 1.06% 1626
chr16 1118648 1.24% 1720
chr17 1864110 2.24% 2692
chr18 402952 0.50% 690
chr19 1296566 2.21% 1881
chr20 818351 1.27% 1250
chr21 263248 0.56% 438
chr22 811954 1.60% 1194
chrX 118912 0.08% 237
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43571 185 7436 633.08 525
global segment-length histogram

Files

Filename Size md5
ENCFF973BAM.bed.gz 829.01 KB 29cf4cbc348912940de222cdc897c701
ENCFF973BAM.tabix.bed.gz 433.62 KB 1dfd6bb7e7be1f83118144afdc9454d3
ENCFF973BAM.tabix.bed.gz.tbi 193.32 KB ad06e89d64ecad6e8b48525eae5b6bc6
genomic_resource.yaml 1.5 KB 38abc8eea584ac1e0eedd9c8c682216a
statistics/