Resource

Id Histone_ChIP-seq/ENCSR350KJUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR350KJU [biosample_summary="Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR350KJU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0000493/
  • biosample_summary: Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)
  • date_created: 2021-01-28T22:02:14.356343+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR350KJU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR350KJU float

Histone_ChIP-seq_ENCSR350KJU
Histone_ChIP-seq ENCSR350KJU [biosample_summary="Homo sapiens left ventricle myocardium inferior tissue male adult (60 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR350KJU [1.51, 14.8]
n
265,714,903
mean
4.76
sd
1.81

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2657149038.26% 172193
chr1 26400906 10.60% 16743
chr2 21735949 8.97% 14256
chr3 19664664 9.92% 12445
chr4 11905506 6.26% 8424
chr5 15499675 8.54% 10389
chr6 15588613 9.13% 10629
chr7 13305309 8.35% 9065
chr8 11968318 8.25% 8007
chr9 11236705 8.12% 7161
chr10 14424410 10.78% 8938
chr11 13630470 10.09% 8548
chr12 13124143 9.85% 8202
chr13 6919163 6.05% 4738
chr14 8506656 7.95% 5250
chr15 9751687 9.56% 6104
chr16 8272074 9.16% 5335
chr17 11786962 14.16% 6958
chr18 5831752 7.26% 4013
chr19 7747766 13.22% 4826
chr20 6990740 10.85% 4355
chr21 2624677 5.62% 1849
chr22 6019531 11.85% 3391
chrX 2696106 1.73% 2478
chrY 83121 0.15% 89
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 172193 213 77968 1543.12 1015
global segment-length histogram

Files

Filename Size md5
ENCFF003REL.bed.gz 4.08 MB 813346f3aaa4fdaf324f5edde17ee75a
ENCFF003REL.tabix.bed.gz 1.8 MB 192fc24f9a51a3dccd53e1377e890470
ENCFF003REL.tabix.bed.gz.tbi 335.37 KB 0dbd460156fb7a78bdb72fbaf674d59d
genomic_resource.yaml 1.57 KB 5a662a4ea1ae29ec7ad7a79151e49fd1
statistics/