Resource

Id Histone_ChIP-seq/ENCSR349IIIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR349III [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (75 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR349III
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:32.398699+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR349III
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR349III float

Histone_ChIP-seq_ENCSR349III
Histone_ChIP-seq ENCSR349III [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (75 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR349III [1.43, 15.1]
n
9,307,884
mean
4.8
sd
1.44

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 93078840.29% 26723
chr1 561110 0.23% 1650
chr2 621962 0.26% 1909
chr3 455268 0.23% 1338
chr4 518854 0.27% 1562
chr5 645434 0.36% 1770
chr6 387913 0.23% 1190
chr7 529974 0.33% 1576
chr8 389644 0.27% 1190
chr9 303354 0.22% 891
chr10 452650 0.34% 1294
chr11 328702 0.24% 1037
chr12 477090 0.36% 1267
chr13 212740 0.19% 638
chr14 244785 0.23% 715
chr15 232038 0.23% 629
chr16 339021 0.38% 937
chr17 182457 0.22% 534
chr18 174914 0.22% 541
chr19 1024685 1.75% 2235
chr20 203338 0.32% 594
chr21 183818 0.39% 466
chr22 95429 0.19% 273
chrX 727737 0.47% 2455
chrY 14967 0.03% 32
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26723 140 6220 348.31 287
global segment-length histogram

Files

Filename Size md5
ENCFF474ZHV.bed.gz 486.97 KB 7f67cf23a2b5a560da6a29907d02a790
ENCFF474ZHV.tabix.bed.gz 253.94 KB d9ad61159c9f8ac351cc376a4fc4e04b
ENCFF474ZHV.tabix.bed.gz.tbi 160.36 KB a4790c822dccee3ae4b5257ecedab153
genomic_resource.yaml 2.06 KB e1412e76b4f1a91d14c922d69872c84b
statistics/