Resource

Id Histone_ChIP-seq/ENCSR343NWCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR343NWC [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR343NWC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue female adult (51 years)
  • date_created: 2018-10-31T02:59:34.296443+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR343NWC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR343NWC float

Histone_ChIP-seq_ENCSR343NWC
Histone_ChIP-seq ENCSR343NWC [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR343NWC [1.7, 9.52]
n
56,895,204
mean
3.89
sd
0.938

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 568952041.77% 52850
chr1 6018167 2.42% 5498
chr2 3757622 1.55% 3802
chr3 3152950 1.59% 3155
chr4 1773744 0.93% 1974
chr5 2476853 1.36% 2472
chr6 2177960 1.28% 2213
chr7 2526723 1.59% 2456
chr8 1569048 1.08% 1656
chr9 2805537 2.03% 2476
chr10 2410454 1.80% 2407
chr11 3192217 2.36% 2818
chr12 3464090 2.60% 3049
chr13 843859 0.74% 951
chr14 1932239 1.81% 1855
chr15 2037417 2.00% 1972
chr16 3194780 3.54% 2647
chr17 3649908 4.38% 3121
chr18 680804 0.85% 778
chr19 4552723 7.77% 3374
chr20 1872059 2.90% 1685
chr21 644599 1.38% 602
chr22 1765568 3.47% 1440
chrX 395883 0.25% 449
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52850 220 22538 1076.54 800
global segment-length histogram

Files

Filename Size md5
ENCFF650OEI.bed.gz 1.1 MB 378db68ec7a7ee14856bb114b5b71911
ENCFF650OEI.tabix.bed.gz 551.3 KB 08cd020876dcc03197c0ab8c3091c025
ENCFF650OEI.tabix.bed.gz.tbi 126.79 KB ff44c5c0f22ca52751aca662557e14fa
genomic_resource.yaml 1.73 KB 4cf127fdc05178644ce753f29cb1fe38
statistics/