Resource

Id Histone_ChIP-seq/ENCSR340FUGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR340FUG [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR340FUG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)
  • date_created: 2021-04-30T04:18:04.027993+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR340FUG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (87 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR340FUG float

Histone_ChIP-seq_ENCSR340FUG
Histone_ChIP-seq ENCSR340FUG [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR340FUG [1.71, 45]
n
54,885,202
mean
19.8
sd
10.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 548852021.71% 32012
chr1 5326983 2.14% 3099
chr2 3828278 1.58% 2255
chr3 3275237 1.65% 1842
chr4 2262831 1.19% 1344
chr5 2788021 1.54% 1571
chr6 3172716 1.86% 1876
chr7 2642981 1.66% 1644
chr8 2195805 1.51% 1275
chr9 2231950 1.61% 1316
chr10 2398406 1.79% 1407
chr11 2949318 2.18% 1648
chr12 2909354 2.18% 1603
chr13 1269502 1.11% 773
chr14 1757347 1.64% 1003
chr15 1716699 1.68% 1024
chr16 2116176 2.34% 1243
chr17 2998119 3.60% 1733
chr18 1039042 1.29% 623
chr19 3250476 5.55% 1940
chr20 1407619 2.18% 812
chr21 535624 1.15% 338
chr22 1217551 2.40% 698
chrX 1595167 1.02% 945
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32012 215 34807 1714.52 1269
global segment-length histogram

Files

Filename Size md5
ENCFF629GOS.bed.gz 817.5 KB a196b242bca629ce0af99ba75bfd98e5
ENCFF629GOS.tabix.bed.gz 364.21 KB d16ff813237c37267636efaca12f7278
ENCFF629GOS.tabix.bed.gz.tbi 189.48 KB 7fa5b816b4908740d4ef2ed52abcea94
genomic_resource.yaml 1.57 KB 69b4da4bfdcec1f2236abdf4e4ae2725
statistics/