Resource

Id Histone_ChIP-seq/ENCSR340DBDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR340DBD [biosample_summary="Homo sapiens angular gyrus tissue male adult (81 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR340DBD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002686/
  • biosample_summary: Homo sapiens angular gyrus tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:23.438360+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR340DBD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR340DBD float

Histone_ChIP-seq_ENCSR340DBD
Histone_ChIP-seq ENCSR340DBD [biosample_summary="Homo sapiens angular gyrus tissue male adult (81 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR340DBD [1.82, 14.1]
n
42,794,692
mean
4.87
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 427946921.33% 53475
chr1 4494116 1.81% 5456
chr2 2774290 1.15% 3700
chr3 2473000 1.25% 3197
chr4 1269633 0.67% 1805
chr5 1807382 1.00% 2399
chr6 1735149 1.02% 2272
chr7 1802061 1.13% 2346
chr8 1189536 0.82% 1662
chr9 2047948 1.48% 2527
chr10 1625995 1.22% 2178
chr11 2461930 1.82% 2952
chr12 2467724 1.85% 2972
chr13 664667 0.58% 956
chr14 1382889 1.29% 1777
chr15 1560616 1.53% 1998
chr16 2305998 2.55% 2681
chr17 2952407 3.55% 3459
chr18 516013 0.64% 753
chr19 3438434 5.87% 3768
chr20 1553355 2.41% 1852
chr21 497529 1.07% 634
chr22 1441050 2.84% 1642
chrX 322796 0.21% 478
chrY 10174 0.02% 11
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 53475 245 10007 800.27 648
global segment-length histogram

Files

Filename Size md5
ENCFF526TTE.bed.gz 1.03 MB 32f809326e2e6e0c3d49f7080641c735
ENCFF526TTE.tabix.bed.gz 535.91 KB bb96181322bace8e49fd73bc0a60819c
ENCFF526TTE.tabix.bed.gz.tbi 140.66 KB 2717f96e19e5960124473a3917cd2f5f
genomic_resource.yaml 2.01 KB b1c771d718f8b73558808231be3f9955
statistics/