Histone_ChIP-seq_ENCSR339PHE
Histone_ChIP-seq ENCSR339PHE [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR339PHE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR339PHE [biosamplesummary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (84 years) output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN219LUI|/analyses/ENCAN219LUI/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF789PHJ|/files/ENCFF789PHJ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 12658455 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR339PHE | float |
Histone_ChIP-seq_ENCSR339PHE |
Histone_ChIP-seq ENCSR339PHE [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K4me1"]
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[1.9, 27.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF455MDI.bed.gz | 2.15 MB | d9002fc984eee2d614c041b271ee9121 |
| ENCFF455MDI.bed.gz.dvc | 101.0 B | c14035df4088c4b273a7f931aa681ec6 |
| ENCFF455MDI.tabix.bed.gz | 1.11 MB | ca40a5ab9ab49762a7d39c1eae832cf7 |
| ENCFF455MDI.tabix.bed.gz.dvc | 107.0 B | 07420a17a60bc28c11eb2ace527e9cfd |
| ENCFF455MDI.tabix.bed.gz.tbi | 304.27 KB | 3fa890161f9a53de0e956a277046bf23 |
| ENCFF455MDI.tabix.bed.gz.tbi.dvc | 110.0 B | 825ac5bd2bc7ae9861b1a14048a5903f |
| genomic_resource.yaml | 2.04 KB | 9f8e2a558f468b2ca860be8e63f0817b |
| genomic_resource_original.yaml | 1.89 KB | 624f7babf04ba8721bf1f31a14ed79ed |
| statistics/ |