Resource

Id Histone_ChIP-seq/ENCSR339FOOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR339FOO [biosample_summary="Homo sapiens NCI-H929" and target="H3K79me2"]
Description
Labels
  • accession: ENCSR339FOO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001221/
  • biosample_summary: Homo sapiens NCI-H929
  • date_created: 2015-05-23T03:46:47.408892+00:00
  • date_released: 2017-01-13
  • doi: 10.17989/ENCSR339FOO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K79me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR339FOO float

Histone_ChIP-seq_ENCSR339FOO
Histone_ChIP-seq ENCSR339FOO [biosample_summary="Homo sapiens NCI-H929" and target="H3K79me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR339FOO [1.35, 13.3]
n
109,654,474
mean
4.45
sd
1.97

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1096544743.41% 70093
chr1 10503812 4.22% 6724
chr2 8891983 3.67% 5749
chr3 8036423 4.05% 4767
chr4 5516354 2.90% 3363
chr5 7603277 4.19% 4438
chr6 6610906 3.87% 4183
chr7 5678312 3.56% 3591
chr8 5159327 3.55% 3099
chr9 4258806 3.08% 2867
chr10 5110237 3.82% 3316
chr11 5327807 3.94% 3563
chr12 5247955 3.94% 3225
chr13 1253483 1.10% 820
chr14 4168379 3.89% 2747
chr15 3860703 3.79% 2600
chr16 3849990 4.26% 2623
chr17 4784469 5.75% 3356
chr18 2253363 2.80% 1439
chr19 3487692 5.95% 2338
chr20 2820045 4.38% 1607
chr21 1075539 2.30% 747
chr22 2264042 4.46% 1618
chrX 1891570 1.21% 1313
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70093 220 74925 1564.41 765
global segment-length histogram

Files

Filename Size md5
ENCFF357CXA.bed.gz 1.59 MB 7b63e66e5dc5478632a0a3784eeaf2d9
ENCFF357CXA.tabix.bed.gz 744.65 KB 6989e0e0d9e8f3348f6c072fd76ae1a7
ENCFF357CXA.tabix.bed.gz.tbi 119.65 KB d18dbb903b00ddcb3e2d950a0f0528eb
genomic_resource.yaml 1.37 KB 3a074f21fd1e7f2ebee04a75068f620f
statistics/