Resource

Id Histone_ChIP-seq/ENCSR337RFQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR337RFQ [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR337RFQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:12.584439+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR337RFQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR337RFQ float

Histone_ChIP-seq_ENCSR337RFQ
Histone_ChIP-seq ENCSR337RFQ [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR337RFQ [1.19, 29.2]
n
104,616,400
mean
6.02
sd
4.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1046164003.25% 105679
chr1 4886989 1.96% 4287
chr1_KI270709v1_random 734 1.10% 2
chr1_KI270712v1_random 16721 9.50% 25
chr1_KI270713v1_random 9383 23.03% 9
chr1_KI270714v1_random 5595 13.41% 11
chr2 3973815 1.64% 3536
chr3 1905105 0.96% 1911
chr4 1587704 0.83% 1528
chr5 2338882 1.29% 2051
chr6 2110618 1.24% 1901
chr7 2279291 1.43% 2001
chr8 2486246 1.71% 2279
chr9 2399551 1.73% 2205
chr10 2354666 1.76% 2129
chr11 2423922 1.79% 2171
chr12 2205766 1.66% 1832
chr13 1034838 0.90% 919
chr14 1244019 1.16% 1144
chr14_GL000009v2_random 517 0.26% 2
chr15 1922283 1.88% 1693
chr15_KI270727v1_random 1838 0.41% 4
chr16 1998815 2.21% 1728
chr17 2712266 3.26% 2271
chr17_GL000205v2_random 255 0.14% 1
chr18 894472 1.11% 960
chr19 1598864 2.73% 1361
chr20 1446488 2.24% 1277
chr21 707095 1.51% 679
chr22 1251473 2.46% 1170
chr22_KI270733v1_random 3183 1.77% 3
chrUn_GL000220v1 1886 1.17% 3
chrUn_KI270438v1 3823 3.40% 7
chrUn_KI270744v1 2641 1.57% 7
chrUn_KI270749v1 280 0.18% 1
chrUn_KI270751v1 266 0.18% 1
chrUn_KI270756v1 292 0.37% 1
chrX 58804073 37.69% 64565
chrY 1745 <0.01% 4
3328 contigs with no values (126904530 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105679 250 131593 989.95 529
global segment-length histogram

Files

Filename Size md5
ENCFF609XQH.bed.gz 1.96 MB 4c42df3013821ace45275ba28f458199
ENCFF609XQH.tabix.bed.gz 1005.58 KB 314d8c25cb4595817901019cd25c2487
ENCFF609XQH.tabix.bed.gz.tbi 135.53 KB bbdcb1cb1f57b1e6526c474cca14db15
genomic_resource.yaml 3.13 KB f1da27af0280456df5766f62b16301f2
statistics/