Resource

Id Histone_ChIP-seq/ENCSR327XTScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR327XTS [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR327XTS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (73 years)
  • date_created: 2015-09-15T19:51:44.280810+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR327XTS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (73 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR327XTS float

Histone_ChIP-seq_ENCSR327XTS
Histone_ChIP-seq ENCSR327XTS [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR327XTS [1.96, 84.8]
n
54,560,941
mean
12.7
sd
9.34

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 545609411.70% 69050
chr1 5746694 2.31% 7002
chr2 4022099 1.66% 5212
chr3 3030299 1.53% 4089
chr4 1869673 0.98% 2500
chr5 2546882 1.40% 3250
chr6 2865745 1.68% 3744
chr7 2379641 1.49% 3101
chr8 1894159 1.31% 2599
chr9 2510346 1.81% 3196
chr10 2639317 1.97% 3339
chr11 3088806 2.29% 3650
chr12 2779429 2.09% 3355
chr13 1039550 0.91% 1370
chr14 2004901 1.87% 2550
chr15 1942032 1.90% 2481
chr16 2233347 2.47% 2884
chr17 3492389 4.19% 4059
chr18 908633 1.13% 1246
chr19 2852672 4.87% 3408
chr20 1587109 2.46% 1983
chr21 676637 1.45% 887
chr22 1509289 2.97% 1801
chrX 940466 0.60% 1342
chrY 826 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 69050 165 12749 790.17 559
global segment-length histogram

Files

Filename Size md5
ENCFF089APD.bed.gz 1.53 MB 1eafa14174f22905f56eadb416827797
ENCFF089APD.tabix.bed.gz 718.72 KB 78a2c0899906f4e6c446517a1b723b14
ENCFF089APD.tabix.bed.gz.tbi 213.72 KB e3f5f58b1b9b6439472422460d77d4d5
genomic_resource.yaml 2.01 KB 248281e52dba6f98e55e2a209e2cf46f
statistics/