Resource

Id Histone_ChIP-seq/ENCSR324EFPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR324EFP [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR324EFP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive
  • date_created: 2015-09-15T19:49:13.683476+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR324EFP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Experiment b2cb70ab-1348-441e-b2a2-562dc83f97fa merged into ENCSR324EFP.
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR324EFP float

Histone_ChIP-seq_ENCSR324EFP
Histone_ChIP-seq ENCSR324EFP [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR324EFP [2.08, 35.4]
n
19,026,496
mean
5.84
sd
1.74

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 190264960.59% 44694
chr1 2014418 0.81% 4613
chr2 1681907 0.69% 3864
chr3 1423879 0.72% 3371
chr4 939163 0.49% 2207
chr5 1072179 0.59% 2531
chr6 1342202 0.79% 3144
chr7 890182 0.56% 2142
chr8 832372 0.57% 1976
chr9 764751 0.55% 1783
chr10 890036 0.67% 2108
chr11 918401 0.68% 2105
chr12 1126658 0.85% 2586
chr13 519998 0.45% 1221
chr14 683389 0.64% 1588
chr15 698186 0.68% 1589
chr16 462364 0.51% 1148
chr17 736293 0.88% 1737
chr18 396811 0.49% 932
chr19 375927 0.64% 981
chr20 445690 0.69% 1058
chr21 273969 0.59% 644
chr22 273372 0.54% 684
chrX 264094 0.17% 681
chrY 255 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44694 160 3434 425.71 350
global segment-length histogram

Files

Filename Size md5
ENCFF647WEK.bed.gz 766.7 KB 069aa732eb6ae5c6fcb24296b9b73fef
ENCFF647WEK.tabix.bed.gz 416.09 KB fef85a6d3834b83eafa3cd6469707f44
ENCFF647WEK.tabix.bed.gz.tbi 187.39 KB b999b607a23f2ec70fd2c07b6b850bc6
genomic_resource.yaml 2.05 KB 3328362f790efe36cd98518d9dd8c036
statistics/