Resource

Id Histone_ChIP-seq/ENCSR322BLCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR322BLC [biosample_summary="Homo sapiens lung tissue female embryo (85 days)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR322BLC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue female embryo (85 days)
  • date_created: 2015-09-15T19:52:12.769392+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR322BLC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (85 days)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR322BLC float

Histone_ChIP-seq_ENCSR322BLC
Histone_ChIP-seq ENCSR322BLC [biosample_summary="Homo sapiens lung tissue female embryo (85 days)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR322BLC [1.57, 14.1]
n
17,143,170
mean
5.12
sd
1.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 171431700.53% 38419
chr1 965059 0.39% 2265
chr1_KI270709v1_random 1275 1.91% 4
chr2 1100265 0.45% 2610
chr2_KI270716v1_random 2253 1.46% 5
chr3 809415 0.41% 1950
chr4 888967 0.47% 2075
chr4_GL000008v2_random 4367 2.08% 1
chr5 1069239 0.59% 2409
chr5_GL000208v1_random 2565 2.77% 6
chr6 721960 0.42% 1730
chr7 1006014 0.63% 2348
chr8 828118 0.57% 1938
chr9 542052 0.39% 1193
chr9_KI270720v1_random 661 1.69% 1
chr10 862411 0.64% 1956
chr11 675862 0.50% 1628
chr12 757965 0.57% 1698
chr13 427594 0.37% 1048
chr14 463513 0.43% 1101
chr14_GL000225v1_random 40983 19.41% 74
chr14_KI270722v1_random 15379 7.93% 29
chr14_KI270723v1_random 327 0.86% 1
chr14_KI270724v1_random 275 0.70% 1
chr15 452585 0.44% 1009
chr16 620462 0.69% 1359
chr16_KI270728v1_random 320 0.02% 1
chr17 348066 0.42% 778
chr17_GL000205v2_random 22410 12.07% 31
chr17_KI270729v1_random 30753 10.95% 48
chr17_KI270730v1_random 9916 8.81% 15
chr18 366878 0.46% 864
chr19 1902292 3.25% 3299
chr20 374390 0.58% 829
chr21 317819 0.68% 616
chr22 180195 0.35% 409
chr22_KI270733v1_random 4156 2.31% 11
chr22_KI270735v1_random 2302 5.38% 4
chr22_KI270736v1_random 21482 11.81% 25
chr22_KI270738v1_random 1981 1.99% 5
chrUn_GL000214v1 297 0.22% 1
chrUn_GL000216v2 46981 26.60% 51
chrUn_GL000219v1 7810 4.36% 10
chrUn_GL000220v1 277 0.17% 1
chrUn_GL000224v1 8375 4.66% 18
chrUn_KI270429v1 245 18.00% 1
chrUn_KI270435v1 1214 1.31% 3
chrUn_KI270438v1 15378 13.67% 27
chrUn_KI270442v1 52482 13.39% 71
chrUn_KI270448v1 268 3.35% 1
chrUn_KI270467v1 1240 31.63% 2
chrUn_KI270508v1 277 14.20% 1
chrUn_KI270511v1 399 4.91% 1
chrUn_KI270512v1 990 4.36% 2
chrUn_KI270515v1 327 5.14% 1
chrUn_KI270516v1 272 20.92% 1
chrUn_KI270517v1 239 7.35% 1
chrUn_KI270519v1 3102 2.25% 6
chrUn_KI270522v1 220 3.88% 1
chrUn_KI270538v1 3358 3.68% 8
chrUn_KI270587v1 893 30.08% 2
chrUn_KI270589v1 2899 6.52% 3
chrUn_KI270590v1 414 8.84% 1
chrUn_KI270591v1 559 9.64% 1
chrUn_KI270744v1 614 0.36% 2
chrUn_KI270746v1 1119 1.68% 3
chrUn_KI270747v1 204 0.10% 1
chrUn_KI270750v1 4331 2.91% 12
chrUn_KI270751v1 1824 1.21% 3
chrUn_KI270753v1 320 0.51% 1
chrUn_KI270756v1 4622 5.81% 8
chrUn_KI270757v1 4064 5.70% 9
chrX 1114790 0.71% 2760
chrY 20240 0.04% 31
3293 contigs with no values (122346842 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38419 155 11491 446.22 374
global segment-length histogram

Files

Filename Size md5
ENCFF419YLM.bed.gz 700.55 KB 31c0a7ae87410f78cf24aed42207184d
ENCFF419YLM.tabix.bed.gz 366.01 KB a64f175eb9e0eeb9a1c9686f780f3f8f
ENCFF419YLM.tabix.bed.gz.tbi 197.48 KB 730f54914ad8a4d88ca3fdd0eef179fb
genomic_resource.yaml 1.97 KB 8fcf558151aa371c06f4e5c6d7868cda
statistics/