Resource

Id Histone_ChIP-seq/ENCSR316LNOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR316LNO [biosample_summary="Homo sapiens gastroesophageal sphincter tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR316LNO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue female adult (51 years)
  • date_created: 2019-04-27T22:49:25.052610+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR316LNO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR316LNO float

Histone_ChIP-seq_ENCSR316LNO
Histone_ChIP-seq ENCSR316LNO [biosample_summary="Homo sapiens gastroesophageal sphincter tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR316LNO [1.51, 87.9]
n
148,554,723
mean
18.8
sd
17.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1485547234.62% 80676
chr1 15148700 6.08% 7844
chr2 11439224 4.72% 6407
chr3 9948783 5.02% 5405
chr4 5884832 3.09% 3456
chr5 6890808 3.80% 3972
chr6 7384685 4.32% 4449
chr7 6819457 4.28% 3889
chr8 5616756 3.87% 3341
chr9 6998506 5.06% 3622
chr10 8559990 6.40% 4483
chr11 7928181 5.87% 3969
chr12 7697209 5.78% 4141
chr13 3363157 2.94% 1878
chr14 5151398 4.81% 2695
chr15 5319998 5.22% 2948
chr16 5191019 5.75% 2792
chr17 8100045 9.73% 4014
chr18 2505456 3.12% 1592
chr19 5987721 10.21% 2872
chr20 4252492 6.60% 2269
chr21 1726676 3.70% 995
chr22 3718651 7.32% 1826
chrX 2920979 1.87% 1817
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80676 225 176214 1841.37 1067
global segment-length histogram

Files

Filename Size md5
ENCFF700ONQ.bed.gz 2.07 MB ea6a6e7f34e750514835fd08ebd0b2b7
ENCFF700ONQ.tabix.bed.gz 904.74 KB b362981c7f4127406f7f4f37fc95199c
ENCFF700ONQ.tabix.bed.gz.tbi 240.73 KB ea026e6cb41040fa273ddabaf55145e8
genomic_resource.yaml 1.56 KB d12af0a40c3c9ed4aa536be51810ef89
statistics/