Resource

Id Histone_ChIP-seq/ENCSR315EZGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR315EZG [biosample_summary="Homo sapiens transverse colon tissue female adult (51 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR315EZG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue female adult (51 years)
  • date_created: 2018-11-07T17:36:01.528218+00:00
  • date_released: 2018-12-14
  • doi: 10.17989/ENCSR315EZG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR315EZG float

Histone_ChIP-seq_ENCSR315EZG
Histone_ChIP-seq ENCSR315EZG [biosample_summary="Homo sapiens transverse colon tissue female adult (51 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR315EZG [1.2, 58.2]
n
38,389,420
mean
23.3
sd
12.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 383894201.19% 23321
chr1 3894284 1.56% 2351
chr2 2646433 1.09% 1546
chr3 2129441 1.07% 1295
chr4 1552259 0.82% 880
chr5 1755027 0.97% 1001
chr6 2150612 1.26% 1278
chr7 1926456 1.21% 1165
chr8 1367304 0.94% 858
chr9 1584225 1.14% 963
chr10 1614393 1.21% 1009
chr11 2106505 1.56% 1237
chr12 1986847 1.49% 1139
chr13 777245 0.68% 471
chr14 1257770 1.18% 749
chr15 1246735 1.22% 739
chr16 1551125 1.72% 973
chr17 2321307 2.79% 1413
chr18 638259 0.79% 387
chr19 2527570 4.31% 1691
chr20 977444 1.52% 619
chr21 385561 0.83% 238
chr22 879976 1.73% 563
chrX 1111291 0.71% 754
chrY 1351 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23321 225 26266 1646.13 1490
global segment-length histogram

Files

Filename Size md5
ENCFF287UIZ.bed.gz 670.74 KB 1e2858a321f76e244632e24e51254741
ENCFF287UIZ.tabix.bed.gz 277.53 KB 8f731b2f0ecd6b437ff3fd7a09d20d97
ENCFF287UIZ.tabix.bed.gz.tbi 151.78 KB b0ca47deeb424d317d3e31b73e238b07
genomic_resource.yaml 1.52 KB 0f66e7b05f67ae730b6c79a4524e9372
statistics/