Resource

Id Histone_ChIP-seq/ENCSR313CEHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR313CEH [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (59 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR313CEH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue female adult (59 years)
  • date_created: 2020-05-01T02:36:40.208529+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR313CEH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR313CEH float

Histone_ChIP-seq_ENCSR313CEH
Histone_ChIP-seq ENCSR313CEH [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (59 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR313CEH [1.72, 60.5]
n
104,598,342
mean
10.4
sd
8.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1045983423.25% 71232
chr1 10541296 4.23% 7010
chr2 7938373 3.28% 5518
chr3 6905097 3.48% 4806
chr4 3734065 1.96% 2863
chr5 5027674 2.77% 3500
chr6 5698313 3.34% 4045
chr7 4766916 2.99% 3456
chr8 3958407 2.73% 2848
chr9 4657167 3.37% 3192
chr10 5233353 3.91% 3527
chr11 5619055 4.16% 3629
chr12 5504863 4.13% 3631
chr13 2224597 1.95% 1682
chr14 3501882 3.27% 2331
chr15 3727037 3.65% 2497
chr16 4094431 4.53% 2758
chr17 6185543 7.43% 3812
chr18 1818404 2.26% 1383
chr19 4807032 8.20% 2921
chr20 3010445 4.67% 1927
chr21 1278701 2.74% 889
chr22 2668841 5.25% 1680
chrX 1696850 1.09% 1327
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71232 220 34837 1468.42 1024
global segment-length histogram

Files

Filename Size md5
ENCFF448PFH.bed.gz 1.59 MB eec8dedef30e5b31f03a840d05f67254
ENCFF448PFH.tabix.bed.gz 756.05 KB 8e0719e046fbcd1e7e11396d380713ab
ENCFF448PFH.tabix.bed.gz.tbi 229.38 KB 95f8e83f4aa984ba90925db65df5f12b
genomic_resource.yaml 1.76 KB 6a6ea4ffe7f2d69974911bfc1ad083c4
statistics/