Resource
| Id | Histone_ChIP-seq/ENCSR311DQO |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR311DQO [biosample_summary="Homo sapiens ACC112" and target="H2AFZ"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN270VUQ|/analyses/ENCAN270VUQ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR311DQO | float |
Histone_ChIP-seq_ENCSR311DQO |
Histone_ChIP-seq ENCSR311DQO [biosample_summary="Homo sapiens ACC112" and target="H2AFZ"]
|
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[1.77, 21.6] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 46254424 | 1.44% | 78973 |
| chr1 | 4355779 | 1.75% | 7262 |
| chr2 | 4056489 | 1.67% | 6870 |
| chr3 | 3666300 | 1.85% | 6216 |
| chr4 | 3262732 | 1.72% | 5610 |
| chr5 | 3050275 | 1.68% | 5180 |
| chr6 | 3411898 | 2.00% | 5669 |
| chr7 | 2402591 | 1.51% | 4083 |
| chr8 | 2373151 | 1.64% | 3996 |
| chr9 | 1808890 | 1.31% | 3072 |
| chr10 | 1958567 | 1.46% | 3209 |
| chr11 | 2039517 | 1.51% | 3507 |
| chr12 | 2503985 | 1.88% | 4310 |
| chr13 | 1207714 | 1.06% | 2166 |
| chr14 | 1453723 | 1.36% | 2359 |
| chr15 | 1426449 | 1.40% | 2340 |
| chr16 | 1025794 | 1.14% | 1795 |
| chr17 | 1538610 | 1.85% | 2686 |
| chr17_GL000205v2_random | 1656 | 0.89% | 2 |
| chr18 | 1200980 | 1.49% | 2016 |
| chr19 | 841822 | 1.44% | 1698 |
| chr20 | 774614 | 1.20% | 1352 |
| chr21 | 512592 | 1.10% | 864 |
| chr22 | 313903 | 0.62% | 652 |
| chrUn_GL000219v1 | 889 | 0.50% | 2 |
| chrX | 1040058 | 0.67% | 2016 |
| chrY | 25446 | 0.04% | 41 |
| 3340 contigs with no values (128712296 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 78973 | 180 | 3816 | 585.7 | 490 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF285FXD.bed.gz | 1.68 MB | 6b44e1212330fd887d82d0e4da266df8 |
| ENCFF285FXD.tabix.bed.gz | 811.82 KB | 1c1ae98618bd9efdec3e7d1cfe89cb04 |
| ENCFF285FXD.tabix.bed.gz.tbi | 325.06 KB | d595e40ae3033ebaeaee9efdca18f751 |
| genomic_resource.yaml | 1.42 KB | 9a2f0a902143a5c4546baa57f1964dfa |
| statistics/ |
