Resource

Id Histone_ChIP-seq/ENCSR303BUBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR303BUB [biosample_summary="Homo sapiens tibial artery tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR303BUB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007610/
  • biosample_summary: Homo sapiens tibial artery tissue female adult (51 years)
  • date_created: 2018-10-31T03:13:46.812715+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR303BUB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR303BUB float

Histone_ChIP-seq_ENCSR303BUB
Histone_ChIP-seq ENCSR303BUB [biosample_summary="Homo sapiens tibial artery tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR303BUB [1.46, 15.1]
n
36,314,735
mean
4.42
sd
1.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 363147351.13% 45407
chr1 2079213 0.84% 2903
chr1_KI270706v1_random 653 0.37% 2
chr1_KI270709v1_random 4537 6.79% 4
chr1_KI270712v1_random 1497 0.85% 2
chr2 2062542 0.85% 2994
chr2_KI270716v1_random 2542 1.65% 4
chr3 1774658 0.89% 2511
chr4 1924740 1.01% 2609
chr4_GL000008v2_random 4950 2.36% 2
chr5 2388338 1.32% 2914
chr5_GL000208v1_random 1195 1.29% 3
chr6 1463931 0.86% 2146
chr7 2416709 1.52% 2924
chr8 1652034 1.14% 2254
chr9 1172558 0.85% 1511
chr9_KI270719v1_random 4744 2.68% 6
chr10 1793965 1.34% 2178
chr11 1622322 1.20% 2024
chr12 1840081 1.38% 2140
chr13 778022 0.68% 1178
chr14 839197 0.78% 1170
chr14_GL000194v1_random 1852 0.97% 3
chr14_GL000225v1_random 33649 15.93% 34
chr14_KI270722v1_random 302 0.16% 1
chr14_KI270723v1_random 1126 2.95% 2
chr14_KI270725v1_random 2290 1.33% 3
chr15 851154 0.83% 1098
chr16 1071600 1.19% 1331
chr16_KI270728v1_random 841 0.04% 2
chr17 635195 0.76% 788
chr17_GL000205v2_random 9460 5.10% 13
chr17_KI270729v1_random 68703 24.46% 71
chr17_KI270730v1_random 21471 19.08% 15
chr18 621933 0.77% 890
chr19 4148857 7.08% 3140
chr20 690417 1.07% 926
chr21 517298 1.11% 572
chr22 433991 0.85% 573
chr22_KI270732v1_random 3572 8.60% 4
chr22_KI270733v1_random 4648 2.59% 9
chr22_KI270735v1_random 5993 14.00% 5
chr22_KI270736v1_random 110187 60.57% 56
chr22_KI270738v1_random 12385 12.46% 19
chrUn_GL000214v1 1198 0.87% 3
chrUn_GL000216v2 340 0.19% 1
chrUn_GL000218v1 1166 0.72% 3
chrUn_GL000219v1 12434 6.94% 18
chrUn_GL000220v1 361 0.22% 1
chrUn_GL000224v1 16672 9.28% 16
chrUn_KI270337v1 466 41.57% 1
chrUn_KI270429v1 304 22.34% 1
chrUn_KI270435v1 6172 6.64% 8
chrUn_KI270438v1 36925 32.82% 40
chrUn_KI270442v1 110084 28.08% 90
chrUn_KI270465v1 408 23.00% 1
chrUn_KI270466v1 978 79.32% 1
chrUn_KI270467v1 1536 39.18% 1
chrUn_KI270508v1 603 30.91% 1
chrUn_KI270509v1 404 17.43% 1
chrUn_KI270510v1 532 22.03% 1
chrUn_KI270512v1 2365 10.42% 3
chrUn_KI270517v1 1052 32.34% 1
chrUn_KI270519v1 8737 6.33% 15
chrUn_KI270522v1 325 5.73% 1
chrUn_KI270538v1 1995 2.18% 3
chrUn_KI270580v1 481 30.97% 1
chrUn_KI270588v1 1014 16.47% 2
chrUn_KI270589v1 3035 6.82% 1
chrUn_KI270590v1 1613 34.43% 1
chrUn_KI270591v1 3294 56.83% 3
chrUn_KI270593v1 415 13.65% 1
chrUn_KI270741v1 364 0.23% 1
chrUn_KI270742v1 490 0.26% 1
chrUn_KI270743v1 1095 0.52% 3
chrUn_KI270744v1 3549 2.11% 3
chrUn_KI270746v1 596 0.90% 1
chrUn_KI270749v1 2797 1.76% 2
chrUn_KI270750v1 527 0.35% 1
chrUn_KI270751v1 2292 1.52% 2
chrUn_KI270753v1 568 0.90% 1
chrUn_KI270754v1 739 1.84% 2
chrUn_KI270756v1 3860 4.85% 6
chrUn_KI270757v1 9548 13.40% 9
chrX 2974657 1.91% 4094
chrY 23392 0.04% 27
3281 contigs with no values (120782627 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45407 210 45700 799.76 613
global segment-length histogram

Files

Filename Size md5
ENCFF397CMM.bed.gz 872.01 KB 4e6c881e0dbda0bcf346f58670a60ec8
ENCFF397CMM.tabix.bed.gz 451.23 KB e05ea4823fa29a644d053c7555e1c86f
ENCFF397CMM.tabix.bed.gz.tbi 221.23 KB 4cba23ee8eb1a4055f32b37cc7b2c5b0
genomic_resource.yaml 1.51 KB c95ca286a0ff0fb0a23b59bae29a49b6
statistics/