Resource

Id Histone_ChIP-seq/ENCSR299NYBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR299NYB [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR299NYB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (56 years)
  • date_created: 2021-08-25T18:07:59.503412+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR299NYB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR299NYB float

Histone_ChIP-seq_ENCSR299NYB
Histone_ChIP-seq ENCSR299NYB [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR299NYB [1.54, 13.2]
n
180,134,039
mean
4.61
sd
1.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1801340395.60% 134342
chr1 18106718 7.27% 13179
chr2 14972941 6.18% 11089
chr3 12659973 6.38% 9583
chr4 7199015 3.78% 5867
chr5 9711046 5.35% 7351
chr6 10717833 6.27% 8304
chr7 8232605 5.17% 6514
chr8 7654681 5.27% 5910
chr9 7758675 5.61% 5801
chr10 9530482 7.12% 6988
chr11 9446442 6.99% 6813
chr12 9360352 7.02% 6829
chr13 4298742 3.76% 3460
chr14 6118262 5.72% 4392
chr15 6735072 6.60% 4718
chr16 5969633 6.61% 4305
chr17 9253132 11.11% 6338
chr18 3204352 3.99% 2596
chr19 6125851 10.45% 4570
chr20 5163874 8.01% 3641
chr21 2129533 4.56% 1593
chr22 3835087 7.55% 2665
chrX 1949738 1.25% 1836
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 134342 210 35389 1340.86 957
global segment-length histogram

Files

Filename Size md5
ENCFF717WVB.bed.gz 2.88 MB 7c103e2beb84183ac85ed2943b91be24
ENCFF717WVB.tabix.bed.gz 1.36 MB 9cc8a33fe607b4c81f355f983680a53c
ENCFF717WVB.tabix.bed.gz.tbi 295.29 KB 6d3403631d1e8797c894aeb41efc4613
genomic_resource.yaml 1.54 KB 00b83c7a3e0b3db9c25cbee6d13a533f
statistics/