Resource

Id Histone_ChIP-seq/ENCSR294GDIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR294GDI [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR294GDI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (73 years)
  • date_created: 2015-09-15T19:51:46.309915+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR294GDI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (73 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR294GDI float

Histone_ChIP-seq_ENCSR294GDI
Histone_ChIP-seq ENCSR294GDI [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR294GDI [2.06, 23]
n
14,350,921
mean
5.05
sd
1.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 143509210.45% 35130
chr1 655816 0.26% 1664
chr2 753109 0.31% 2009
chr3 547775 0.28% 1461
chr4 716996 0.38% 1833
chr5 908226 0.50% 2280
chr6 525736 0.31% 1466
chr7 958792 0.60% 2397
chr8 839023 0.58% 2069
chr9 449994 0.33% 1114
chr10 521277 0.39% 1369
chr11 524999 0.39% 1426
chr12 722321 0.54% 1596
chr13 433464 0.38% 1166
chr14 345642 0.32% 949
chr15 534944 0.52% 1180
chr16 490056 0.54% 1204
chr17 300586 0.36% 781
chr18 290760 0.36% 790
chr19 2259941 3.86% 4225
chr20 284576 0.44% 715
chr21 364081 0.78% 885
chr22 194101 0.38% 471
chrX 723557 0.46% 2063
chrY 5149 0.01% 17
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35130 180 14953 408.51 331
global segment-length histogram

Files

Filename Size md5
ENCFF596HEB.bed.gz 579.48 KB bb6e8390432840e70c4a79389b466076
ENCFF596HEB.tabix.bed.gz 310.71 KB c84b49013ef354231cc2133d805812d2
ENCFF596HEB.tabix.bed.gz.tbi 178.54 KB 8eb51a0e5fc53a853f0d3efdf3ced0a7
genomic_resource.yaml 1.52 KB 4b42832a7b5e5dfdf38a56c86096d5ca
statistics/